BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g3200.1
(453 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 136 4e-34
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 136 4e-34
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 101 6e-25
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 136 bits (343), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 89/120 (74%), Gaps = 3/120 (2%)
Query: 334 EPLTYKEAMSTPEAPFWKEAVNSEIESIMNNHTWELVDLPIGCKPLGCKWIFKRKLKTDG 393
EP TY EA E W A++ EI ++ HTWE+ LP KP+GCKW++K K +DG
Sbjct: 85 EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141
Query: 394 SIDKYKARLVAQGFRQREGLDYFDTYSPVTRITSIRLLIAIASIHNLEIHQMDVKTAFLN 453
+I++YKARLVA+G+ Q+EG+D+ +T+SPV ++TS++L++AI++I+N +HQ+D+ AFLN
Sbjct: 142 TIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLN 201
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 136 bits (343), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 89/120 (74%), Gaps = 3/120 (2%)
Query: 334 EPLTYKEAMSTPEAPFWKEAVNSEIESIMNNHTWELVDLPIGCKPLGCKWIFKRKLKTDG 393
EP TY EA E W A++ EI ++ HTWE+ LP KP+GCKW++K K +DG
Sbjct: 85 EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141
Query: 394 SIDKYKARLVAQGFRQREGLDYFDTYSPVTRITSIRLLIAIASIHNLEIHQMDVKTAFLN 453
+I++YKARLVA+G+ Q+EG+D+ +T+SPV ++TS++L++AI++I+N +HQ+D+ AFLN
Sbjct: 142 TIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLN 201
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 101 bits (251), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 75/118 (63%), Gaps = 5/118 (4%)
Query: 327 LTYMLESEPLTYKEAMSTPEAPFWKEAVNSEIESIMNNHTWELVDLPIGCKPLGCKWIFK 386
+T ++ EP K + + P W +A+ E++++ N TW LV P+ LGCKW+FK
Sbjct: 20 ITTTIKKEP---KSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFK 76
Query: 387 RKLKTDGSIDKYKARLVAQGFRQREGLDYFDTYSPVTRITSIRLLIAIASIHNLEIHQ 444
KL +DG++D+ KARLVA+GF Q EG+ + +TYSPV R +IR ++ +A LE+ Q
Sbjct: 77 TKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA--QQLEVGQ 132