BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g3230.1
(262 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 71 6e-14
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 62 1e-10
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 71.2 bits (173), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 14 DRNQFWTDLSDRIQTISNPIC-----CFGDFNTISSPSEKWG---GNNRMPFMSRFNNFM 65
+R W D++ R+ + S+P+C GDFN I+S +E + N + + M
Sbjct: 100 ERRSLWDDIT-RL-SASSPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQACM 157
Query: 66 NNTGLLDLGFYGPGFTWTNNRSIHHLTRERLDRAICNADWLLNFPNAGLFHLPRYNSDYA 125
++ L+DL G +TW+N++ + + R +LDRAI N WL FP A P +SD+A
Sbjct: 158 RDSDLVDLPCRGVLYTWSNHQQDNPILR-KLDRAIVNGCWLATFPTASAIFDPPSDSDHA 216
Query: 126 PVLLRLHSQTNIIWSIA-KYEIYWSSHPSFHDTFKRNW--ESSTGSFHSKATQI----KS 178
++ L++ + + KY + S+HP F + W E + GSF ++ K
Sbjct: 217 ACMVILNNSPPLSKKKSFKYFSFLSTHPDFISSILAAWQKEIAVGSFMFSLGELLKEAKK 276
Query: 179 ALHGWSKHTFEEHISKEIEAHFQNLYQAESLG 210
A G ++ F ++ + L++AE +
Sbjct: 277 ACRGLNRRGFSNIQAQLMSNPSDFLFRAEHVA 308
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 71/132 (53%), Gaps = 6/132 (4%)
Query: 36 FGDFNTISSPSEKWGG-NNRMPF--MSRFNNFMNNTGLLDLGFYGPGFTWTNNRSIHHLT 92
GDF+ I++ S+ + +P + F N + ++ L+D+ G +TW+N++ + +
Sbjct: 224 VGDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNPII 283
Query: 93 RERLDRAICNADWLLNFPNA-GLFHLPRYNSDYAPVLLRLHSQTNIIWSIAKYEIYWSSH 151
R +LDRAI N DW +FP+A +F L SD++P ++ L + +Y + S+H
Sbjct: 284 R-KLDRAIANGDWFSSFPSAIAVFELSGV-SDHSPCIIILENLPKRSKKCFRYFSFLSTH 341
Query: 152 PSFHDTFKRNWE 163
P+F + WE
Sbjct: 342 PTFLVSLTVAWE 353