BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g3300.1
(213 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G37800.1 | xyloglucan endotransglucosylase/hydrolase 7 | Chr4... 362 e-128
AT5G65730.1 | xyloglucan endotransglucosylase/hydrolase 6 | Chr5... 355 e-125
AT4G03210.2 | xyloglucan endotransglucosylase/hydrolase 9 | Chr4... 268 3e-91
AT4G03210.1 | xyloglucan endotransglucosylase/hydrolase 9 | Chr4... 268 2e-90
AT5G13870.3 | xyloglucan endotransglucosylase/hydrolase 5 | Chr5... 259 3e-87
>AT4G37800.1 | xyloglucan endotransglucosylase/hydrolase 7 |
Chr4:17775703-17777372 REVERSE LENGTH=293 | 201606
Length = 293
Score = 362 bits (930), Expect = e-128, Method: Compositional matrix adjust.
Identities = 163/209 (77%), Positives = 183/209 (87%)
Query: 1 MKIKLVPGDSAGTVTAFYMNSDTDTVRDELDFEFLGNKTGQPYTVQTNVYAHGKGDREER 60
MKIKL+PGDSAGTVTAFYMNSDTD+VRDELDFEFLGN++GQPYTVQTNV+AHGKGDRE+R
Sbjct: 81 MKIKLIPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRSGQPYTVQTNVFAHGKGDREQR 140
Query: 61 VNLWFDPAADFHTYTIFWNHHIVVFSVDEVPIRVYKNNEANGVPFPKFQPMGVYSTLWEA 120
VNLWFDP+ DFH Y I WNH +VF VD VPIRVYKNNEA VP+P+FQPMGVYSTLWEA
Sbjct: 141 VNLWFDPSRDFHEYAISWNHLRIVFYVDNVPIRVYKNNEARKVPYPRFQPMGVYSTLWEA 200
Query: 121 DDWATRGGLDKINWSKAPFYAYYKDFDIEGCPVPGPAYCASNPKNWWESPTYQQLSAAQM 180
DDWATRGG++KINWS+APFYAYYKDFDIEGCPVPGPA C +N KNWWE Y QLS +
Sbjct: 201 DDWATRGGIEKINWSRAPFYAYYKDFDIEGCPVPGPADCPANSKNWWEGSAYHQLSPVEA 260
Query: 181 SKYKWVQSNHLIYDYCIDKSRYPVTPREC 209
Y+WV+ NH++YDYC DKSR+PV P EC
Sbjct: 261 RSYRWVRVNHMVYDYCTDKSRFPVPPPEC 289
>AT5G65730.1 | xyloglucan endotransglucosylase/hydrolase 6 |
Chr5:26299080-26300290 FORWARD LENGTH=292 | 201606
Length = 292
Score = 355 bits (911), Expect = e-125, Method: Compositional matrix adjust.
Identities = 157/209 (75%), Positives = 183/209 (87%)
Query: 1 MKIKLVPGDSAGTVTAFYMNSDTDTVRDELDFEFLGNKTGQPYTVQTNVYAHGKGDREER 60
MKIKL+PGDSAGTVTAFYMNSDT TVRDELDFEFLGN++GQPY+VQTN++AHGKGDRE+R
Sbjct: 82 MKIKLIPGDSAGTVTAFYMNSDTATVRDELDFEFLGNRSGQPYSVQTNIFAHGKGDREQR 141
Query: 61 VNLWFDPAADFHTYTIFWNHHIVVFSVDEVPIRVYKNNEANGVPFPKFQPMGVYSTLWEA 120
VNLWFDP+ D+HTYTI W+H +VF VD+VPIR YKNNEA + +P QPMGVYSTLWEA
Sbjct: 142 VNLWFDPSMDYHTYTILWSHKHIVFYVDDVPIREYKNNEAKNIAYPTSQPMGVYSTLWEA 201
Query: 121 DDWATRGGLDKINWSKAPFYAYYKDFDIEGCPVPGPAYCASNPKNWWESPTYQQLSAAQM 180
DDWATRGGL+KI+WSKAPFYAYYKDFDIEGCPVPGP +C SNP NWWE YQ L+A +
Sbjct: 202 DDWATRGGLEKIDWSKAPFYAYYKDFDIEGCPVPGPTFCPSNPHNWWEGYAYQSLNAVEA 261
Query: 181 SKYKWVQSNHLIYDYCIDKSRYPVTPREC 209
+Y+WV+ NH++YDYC D+SR+PV P EC
Sbjct: 262 RRYRWVRVNHMVYDYCTDRSRFPVPPPEC 290
>AT4G03210.2 | xyloglucan endotransglucosylase/hydrolase 9 |
Chr4:1416107-1417197 FORWARD LENGTH=262 | 201606
Length = 262
Score = 268 bits (686), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 155/212 (73%), Gaps = 4/212 (1%)
Query: 1 MKIKLVPGDSAGTVTAFYMNSDTDTVRDELDFEFLGNKTGQPYTVQTNVYAHGKGDREER 60
++IKLV GDSAGTVTAFYM+SD +E DFEFLGN TG+PY VQTN+Y +G G+RE+R
Sbjct: 46 IQIKLVEGDSAGTVTAFYMSSDGPN-HNEFDFEFLGNTTGEPYIVQTNIYVNGVGNREQR 104
Query: 61 VNLWFDPAADFHTYTIFWNHHIVVFSVDEVPIRVYKNNEANGVPFPKFQPMGVYSTLWEA 120
+NLWFDP +FHTY+I W+ VVF VDE PIRV KN E G+PF K Q MGVYS++W A
Sbjct: 105 LNLWFDPTTEFHTYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVYSSIWNA 164
Query: 121 DDWATRGGLDKINWSKAPFYAYYKDFDIEGCPVPGP---AYCASNPKNWWESPTYQQLSA 177
DDWAT+GGL K +WS APF A YK+F I+ C +P + C + K WW+ PT +LS
Sbjct: 165 DDWATQGGLVKTDWSHAPFVASYKEFQIDACEIPTTTDLSKCNGDQKFWWDEPTVSELSL 224
Query: 178 AQMSKYKWVQSNHLIYDYCIDKSRYPVTPREC 209
Q + WV++NH+IYDYC D +R+PVTP EC
Sbjct: 225 HQNHQLIWVRANHMIYDYCFDATRFPVTPLEC 256
>AT4G03210.1 | xyloglucan endotransglucosylase/hydrolase 9 |
Chr4:1416019-1417197 FORWARD LENGTH=290 | 201606
Length = 290
Score = 268 bits (684), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 155/212 (73%), Gaps = 4/212 (1%)
Query: 1 MKIKLVPGDSAGTVTAFYMNSDTDTVRDELDFEFLGNKTGQPYTVQTNVYAHGKGDREER 60
++IKLV GDSAGTVTAFYM+SD +E DFEFLGN TG+PY VQTN+Y +G G+RE+R
Sbjct: 74 IQIKLVEGDSAGTVTAFYMSSDGPN-HNEFDFEFLGNTTGEPYIVQTNIYVNGVGNREQR 132
Query: 61 VNLWFDPAADFHTYTIFWNHHIVVFSVDEVPIRVYKNNEANGVPFPKFQPMGVYSTLWEA 120
+NLWFDP +FHTY+I W+ VVF VDE PIRV KN E G+PF K Q MGVYS++W A
Sbjct: 133 LNLWFDPTTEFHTYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVYSSIWNA 192
Query: 121 DDWATRGGLDKINWSKAPFYAYYKDFDIEGCPVPGP---AYCASNPKNWWESPTYQQLSA 177
DDWAT+GGL K +WS APF A YK+F I+ C +P + C + K WW+ PT +LS
Sbjct: 193 DDWATQGGLVKTDWSHAPFVASYKEFQIDACEIPTTTDLSKCNGDQKFWWDEPTVSELSL 252
Query: 178 AQMSKYKWVQSNHLIYDYCIDKSRYPVTPREC 209
Q + WV++NH+IYDYC D +R+PVTP EC
Sbjct: 253 HQNHQLIWVRANHMIYDYCFDATRFPVTPLEC 284
>AT5G13870.3 | xyloglucan endotransglucosylase/hydrolase 5 |
Chr5:4475089-4476217 REVERSE LENGTH=293 | 201606
Length = 293
Score = 259 bits (663), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 117/210 (55%), Positives = 156/210 (74%), Gaps = 2/210 (0%)
Query: 1 MKIKLVPGDSAGTVTAFYMNSDTDTVRDELDFEFLGNKTGQPYTVQTNVYAHGKGDREER 60
M IK+V GDSAGTVTAFY++S ++ DE+DFEFLGN+TGQPY +QTNV+ G G+RE+R
Sbjct: 79 MHIKMVAGDSAGTVTAFYLSSQ-NSEHDEIDFEFLGNRTGQPYILQTNVFTGGAGNREQR 137
Query: 61 VNLWFDPAADFHTYTIFWNHHIVVFSVDEVPIRVYKNNEANGVPFPKFQPMGVYSTLWEA 120
+NLWFDP+ D+H+Y++ WN + +VF VD+VPIRV+KN++ GV FP QPM +YS+LW A
Sbjct: 138 INLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNA 197
Query: 121 DDWATRGGLDKINWSKAPFYAYYKDFDIEGCPVPGPA-YCASNPKNWWESPTYQQLSAAQ 179
DDWATRGGL+K NW KAPF A Y+ F ++GC A +C + K WW+ +Q L A Q
Sbjct: 198 DDWATRGGLEKTNWEKAPFVASYRGFHVDGCEASVNAKFCETQGKRWWDQKEFQDLDANQ 257
Query: 180 MSKYKWVQSNHLIYDYCIDKSRYPVTPREC 209
+ KWV+ + IY+YC D+ R+PV P EC
Sbjct: 258 YKRLKWVRKRYTIYNYCTDRVRFPVPPPEC 287