BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g3330.1
(329 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G22850.1 | SNARE associated Golgi protein family | Chr1:80806... 366 e-126
AT1G22850.2 | SNARE associated Golgi protein family | Chr1:80811... 338 e-116
AT1G03260.1 | SNARE associated Golgi protein family | Chr1:79567... 105 3e-26
AT5G19070.1 | SNARE associated Golgi protein family | Chr5:63755... 84 3e-18
AT5G19070.2 | SNARE associated Golgi protein family | Chr5:63755... 81 2e-17
>AT1G22850.1 | SNARE associated Golgi protein family |
Chr1:8080671-8082816 REVERSE LENGTH=344 | 201606
Length = 344
Score = 366 bits (939), Expect = e-126, Method: Compositional matrix adjust.
Identities = 203/290 (70%), Positives = 229/290 (78%), Gaps = 2/290 (0%)
Query: 33 LPKRTHFFKPCFSSLREPKKPVHH--KTSNTPQGLRRSGIPKKDGEGDSPIDNYQSSSID 90
L KR HF KPC S + KK T+ PQ LR K + + D S D
Sbjct: 38 LYKRFHFLKPCSSLKQTKKKKQQSLPSTAPPPQSLRWFFNSKSTNDENDEDDVKSESDDD 97
Query: 91 SSFDNETAVKGTVLAGFLLVGVLGGFATVGYLYKDQINAFLMQFSDFIEGYGPAGYALFV 150
+ + A+KGT+LAG LL+G +GGFA VGY+Y+DQIN FL QFS +IEGYG AGYALF+
Sbjct: 98 GGSEGDAAIKGTILAGVLLIGTVGGFAGVGYVYRDQINTFLTQFSTYIEGYGTAGYALFI 157
Query: 151 AAYAGLEVLAIPAIPLTMSAGVLFGSSTGTILVSISGTVAATVAFLIARYFARERILKLV 210
A YAGLE+LAIPA+PLTMSAG+LFG GTI+VSISGT+AA+VAFLIARYFARERILKLV
Sbjct: 158 AVYAGLEILAIPALPLTMSAGLLFGPLIGTIIVSISGTMAASVAFLIARYFARERILKLV 217
Query: 211 DGNKKFLAIDKAIGKNGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPG 270
+ NKKFLAIDKAIG+NGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPG
Sbjct: 218 EDNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPG 277
Query: 271 TWAYVSAGALGRAIIQEESVVGLPKGNSQLITVGLGLLATALAAAYVTQL 320
+WAYVSAGA GRAIIQEES VGLP GN QL+T+G+GLL TALA YVT L
Sbjct: 278 SWAYVSAGAFGRAIIQEESNVGLPGGNGQLLTLGVGLLVTALAGTYVTSL 327
>AT1G22850.2 | SNARE associated Golgi protein family |
Chr1:8081181-8082816 REVERSE LENGTH=298 | 201606
Length = 298
Score = 338 bits (866), Expect = e-116, Method: Compositional matrix adjust.
Identities = 178/256 (69%), Positives = 202/256 (78%), Gaps = 2/256 (0%)
Query: 33 LPKRTHFFKPCFSSLREPKKPVHH--KTSNTPQGLRRSGIPKKDGEGDSPIDNYQSSSID 90
L KR HF KPC S + KK T+ PQ LR K + + D S D
Sbjct: 38 LYKRFHFLKPCSSLKQTKKKKQQSLPSTAPPPQSLRWFFNSKSTNDENDEDDVKSESDDD 97
Query: 91 SSFDNETAVKGTVLAGFLLVGVLGGFATVGYLYKDQINAFLMQFSDFIEGYGPAGYALFV 150
+ + A+KGT+LAG LL+G +GGFA VGY+Y+DQIN FL QFS +IEGYG AGYALF+
Sbjct: 98 GGSEGDAAIKGTILAGVLLIGTVGGFAGVGYVYRDQINTFLTQFSTYIEGYGTAGYALFI 157
Query: 151 AAYAGLEVLAIPAIPLTMSAGVLFGSSTGTILVSISGTVAATVAFLIARYFARERILKLV 210
A YAGLE+LAIPA+PLTMSAG+LFG GTI+VSISGT+AA+VAFLIARYFARERILKLV
Sbjct: 158 AVYAGLEILAIPALPLTMSAGLLFGPLIGTIIVSISGTMAASVAFLIARYFARERILKLV 217
Query: 211 DGNKKFLAIDKAIGKNGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPG 270
+ NKKFLAIDKAIG+NGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPG
Sbjct: 218 EDNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPG 277
Query: 271 TWAYVSAGALGRAIIQ 286
+WAYVSAGA GRAII+
Sbjct: 278 SWAYVSAGAFGRAIIE 293
>AT1G03260.1 | SNARE associated Golgi protein family |
Chr1:795678-798102 REVERSE LENGTH=274 | 201606
Length = 274
Score = 105 bits (262), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 91/155 (58%), Gaps = 3/155 (1%)
Query: 124 KDQINAFLMQFSDFIEGYGPAGYALFVAAYAGLEVLAIPAIPLTMSAGVLFGSSTGTILV 183
+ ++ FL+ + + +GP AL AY L ++A+PA LT+ G LFG G +
Sbjct: 33 EQKLKDFLLWIKEDLGPFGPLALAL---AYIPLTIVAVPASVLTLGGGYLFGLPVGFVAD 89
Query: 184 SISGTVAATVAFLIARYFARERILKLVDGNKKFLAIDKAIGKNGFRVVTLLRLSPLLPFS 243
S+ T+ AT AFL+ R + + + KF A+ AI K+GF++V LLR+ P+LPF+
Sbjct: 90 SLGATLGATAAFLLGRTIGKSYVTSKIKHYPKFQAVSVAIQKSGFKIVLLLRVVPILPFN 149
Query: 244 LGNYLYGLTSVKFVPYVLGSWLGMLPGTWAYVSAG 278
+ NYL +T V+ Y+L +WLGM+P T+A V G
Sbjct: 150 MLNYLLSVTPVRLGEYMLATWLGMMPITFALVYVG 184
>AT5G19070.1 | SNARE associated Golgi protein family |
Chr5:6375569-6377470 FORWARD LENGTH=280 | 201606
Length = 280
Score = 83.6 bits (205), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 115/213 (53%), Gaps = 12/213 (5%)
Query: 116 FATVGYLYKDQINAFLMQFSDFIEGYGPAGYALFVAAYAGLEVLAIPAIPLTMSAGVLFG 175
F V L KD FL+ + +GP A+ AY L VLA+PA LT+ G LFG
Sbjct: 27 FLPVEKLLKD----FLLWVEQDLGPWGPFALAV---AYIPLTVLAVPASVLTLGGGYLFG 79
Query: 176 SSTGTILVSISGTVAATVAFLIARYFARERILKLVDGNKKFLAIDKAIGKNGFRVVTLLR 235
G + S+ T+ + AFL+ R + ++ + +F ++ AI K+GF++ LLR
Sbjct: 80 LPIGFVADSVGATLGSGAAFLLGRTIGKPFVVAKLKDYPQFQSVALAIEKSGFKICLLLR 139
Query: 236 LSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPGTWAYVSAGALGRAI--IQEESVVGL 293
L+PLLPFS+ NYL +T ++ PY+L SWLGM+P T A V G + + + +
Sbjct: 140 LAPLLPFSMLNYLLSVTPIRLGPYLLSSWLGMMPITLALVYVGTTLKDLSDVTHKWSEFS 199
Query: 294 PKGNSQLITVGLGLLATALAAAYVTQLAKDAVK 326
P + LI+ L+ + + VT++AKDA++
Sbjct: 200 PGRWAFLIS---SLVISVILMVCVTKVAKDALR 229
>AT5G19070.2 | SNARE associated Golgi protein family |
Chr5:6375569-6377155 FORWARD LENGTH=232 | 201606
Length = 232
Score = 80.9 bits (198), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 90/163 (55%), Gaps = 1/163 (0%)
Query: 117 ATVGYLYKDQINAFLMQFSDFIE-GYGPAGYALFVAAYAGLEVLAIPAIPLTMSAGVLFG 175
A V Y + L F ++E GP G AY L VLA+PA LT+ G LFG
Sbjct: 20 AIVLACYFLPVEKLLKDFLLWVEQDLGPWGPFALAVAYIPLTVLAVPASVLTLGGGYLFG 79
Query: 176 SSTGTILVSISGTVAATVAFLIARYFARERILKLVDGNKKFLAIDKAIGKNGFRVVTLLR 235
G + S+ T+ + AFL+ R + ++ + +F ++ AI K+GF++ LLR
Sbjct: 80 LPIGFVADSVGATLGSGAAFLLGRTIGKPFVVAKLKDYPQFQSVALAIEKSGFKICLLLR 139
Query: 236 LSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPGTWAYVSAG 278
L+PLLPFS+ NYL +T ++ PY+L SWLGM+P T A V G
Sbjct: 140 LAPLLPFSMLNYLLSVTPIRLGPYLLSSWLGMMPITLALVYVG 182