BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g3350.1
(809 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G31480.1 | shoot gravitropism 2 (SGR2) | Chr1:11266225-112715... 1031 0.0
>AT1G31480.1 | shoot gravitropism 2 (SGR2) | Chr1:11266225-11271527
FORWARD LENGTH=933 | 201606
Length = 933
Score = 1031 bits (2667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/846 (61%), Positives = 634/846 (74%), Gaps = 51/846 (6%)
Query: 5 ETSPDELKNTPSNIARLEDVIDQCEGRRKYLAHTKSPSDGEDVRWYFYKVPLAENELAAS 64
ETSPD LKNTPSNIARLEDVI+QC GR+KYLA T+SPSDG DVRWYF KVPLAENELAAS
Sbjct: 15 ETSPDLLKNTPSNIARLEDVIEQCHGRQKYLAQTRSPSDGSDVRWYFCKVPLAENELAAS 74
Query: 65 VPQTEIVGKNEYLRFSMRDSLALEASFLQREEELLFKWWREYGECSEGPIGTHISSEIKS 124
VP+T++VGK+EY RF MRDSLA+EASFLQRE+ELL WW+EY ECSEGP ++S+ KS
Sbjct: 75 VPRTDVVGKSEYFRFGMRDSLAIEASFLQREDELLSLWWKEYAECSEGP-KLQVNSKKKS 133
Query: 125 DLEGESSKGDSSDQLFESEEERVGVPVKGGLFEVDLVKRHCFPVYWSGENRRVLRGHWFA 184
+E S SS L+E EEERVGVPVKGGL+EVDLV+RHCFPVYW+G+NRRVLRGHWFA
Sbjct: 134 -IETPSEASVSS-SLYEVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFA 191
Query: 185 RKAGLDWLPLREDVAERLEFAYRSQIWHRRTFQQSGLFAARIDLQGSTPGLHALFTGEDD 244
RK GLDWLP+ E V+E+LE AYR+++W RR+FQ SGLFAARIDLQGS+ GLHALFTGEDD
Sbjct: 192 RKGGLDWLPIPETVSEQLEVAYRNKVWRRRSFQPSGLFAARIDLQGSSLGLHALFTGEDD 251
Query: 245 TWEAWLNTDASGFSSICGFTGNGIKLRRGYSPSGSAKPTQEDLRQRKEEEMDDYSSQVPV 304
TWEAWLN D SGFS I G+TGNGIKLRRGY+ S S KPTQE+LRQ+KEEEMDDY SQVPV
Sbjct: 252 TWEAWLNVDPSGFSGIVGYTGNGIKLRRGYAGSYSPKPTQEELRQQKEEEMDDYCSQVPV 311
Query: 305 RHLVFMVHGIGQRLEKANLVDDVRDFRHITATLAERHLTTHQLAAQRVVFIPCQWRKGLK 364
RHLVFMVHGIGQ+ EK+NLVDDV +FR ITA LAERHLT+HQL+ QRV+FIPCQWRKGLK
Sbjct: 312 RHLVFMVHGIGQKGEKSNLVDDVGNFRQITAALAERHLTSHQLSTQRVLFIPCQWRKGLK 371
Query: 365 LDGESTVEKVTLEGVRSLRFMLSATVHDVLYYMSPIYCQDIINSVSNQLNRLYSKFIKRN 424
L GE+ V+K TL+GVR R MLSATVHDVLYYMSPIYCQ II+SVS QLNRLY KF+KRN
Sbjct: 372 LSGEAAVDKCTLDGVRRFREMLSATVHDVLYYMSPIYCQAIIDSVSKQLNRLYLKFLKRN 431
Query: 425 PGYDGKVSIYAHSLGSVLSYDILCHQESLSSLLPTDYICNERKKDEDSLPSGENL-SPQS 483
P Y GK+SIY HSLGSVLSYDILCHQ +LSS P D + + DE+S P+ P S
Sbjct: 432 PDYVGKISIYGHSLGSVLSYDILCHQHNLSSPFPMDSVYKKFFPDEESPPTPAKADKPCS 491
Query: 484 CTPS--------------------------------EHADTLSQQP---RESNLQSNELS 508
PS EH D + + P +S + + L
Sbjct: 492 SHPSSNFEPEKSDQLNNPEKITGQDNNTMAKEPTVLEHHDVIQEDPSLISDSVVANVGLE 551
Query: 509 LDDGQESDHGPKDILSQEENSIDEIISINSDAPPNLSEELIERTNTSADTCEEGKTVELL 568
GQE DH ++ D D+P E+ ++ + +++ E ++LL
Sbjct: 552 RRGGQEDDHHDSSGAISSQDVPDGADCRTPDSPSCSQEQSWDKESVNSNNEER---IKLL 608
Query: 569 REEVHSLRARIAELESR----YGDEDKDKGVHLGKLEVDNSSKHQSAEQATATKSYRPHI 624
++EV+SLR+++A+L S DE V +L N+ K Q+ E A A S+ P I
Sbjct: 609 QDEVNSLRSKVAQLLSENARILSDEKAKTSVAPKEL---NNEKVQT-EDADAPTSFTPFI 664
Query: 625 KYTKLEFKVDTFFAVGSPLGFFLSLRNVRIGIGEGEEYWQDKRITEEMPACRQMFNIFHP 684
KY KLEFKVDTFFAVGSPLG FL+LRN+R+GIG+G++YW+++ EEMPACR+MFNIFHP
Sbjct: 665 KYQKLEFKVDTFFAVGSPLGVFLALRNIRLGIGKGKDYWEEENAIEEMPACRRMFNIFHP 724
Query: 685 FDPVAYRVEPLVCKEFISRRPVIIPYHKGGKRLHIGFQDFTEDLSARSQAVLDRLNSMRD 744
+DPVAYRVEPLVCKE++ RPVIIPYH+GGKRLHIG QDF ED +ARSQ +++ +S+R
Sbjct: 725 YDPVAYRVEPLVCKEYLPERPVIIPYHRGGKRLHIGLQDFREDFAARSQRIMNHFDSVRT 784
Query: 745 KVLTVCQS-NKDDIEDTTEIKEEIEGRSYGSIMMERLSGSESGRIDYMLQDKTFEHQYIS 803
+VLT+CQS + D++++ E +E + RSYGS+M+ERL+G+ GRID+MLQ+KTFEH Y+
Sbjct: 785 RVLTICQSKSADNLDEMEETDDEKDDRSYGSLMIERLTGTRDGRIDHMLQEKTFEHPYLQ 844
Query: 804 AIGSHT 809
AIG+HT
Sbjct: 845 AIGAHT 850