BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g3460.1
(229 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G71480.1 | Nuclear transport factor 2 (NTF2) family protein |... 248 1e-83
AT1G71480.3 | Nuclear transport factor 2 (NTF2) family protein |... 183 1e-58
AT1G71480.2 | Nuclear transport factor 2 (NTF2) family protein |... 132 6e-39
AT5G41470.1 | Nuclear transport factor 2 (NTF2) family protein |... 112 6e-30
>AT1G71480.1 | Nuclear transport factor 2 (NTF2) family protein |
Chr1:26932079-26933086 FORWARD LENGTH=216 | 201606
Length = 216
Score = 248 bits (634), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 113/163 (69%), Positives = 137/163 (84%), Gaps = 1/163 (0%)
Query: 67 KVAVADVNGVGEISVRTASDIVKNFYGGINRNDLASVEDLIAENCVYEDLIFSSPFVGRK 126
K A A+ + V E + +AS++V +FY +N +DL+SV DLIA++CVYEDL+FSSPFVGRK
Sbjct: 55 KAATAN-DVVPETAPTSASEVVSSFYAAVNVHDLSSVTDLIAQDCVYEDLVFSSPFVGRK 113
Query: 127 AILDFFKKFTNSISRDLQFVIDDISEEDSLAIGVTWHLEWRGKPFPFSRGCSFYRLEIVN 186
AILDFF KF S S DLQFVIDDIS EDS A+GV+WHLEW+GK FPFS+GCSFYRLE+++
Sbjct: 114 AILDFFGKFIESTSTDLQFVIDDISTEDSSAVGVSWHLEWKGKNFPFSKGCSFYRLEVID 173
Query: 187 GKKQIIYGRDSVEPSIKPGETALIAIKGVTWLLQRFPQLGDQL 229
GK+QI+YGRD VEP+IKPGET L AIKGVTWLLQ+FPQL DQ
Sbjct: 174 GKRQIVYGRDCVEPAIKPGETVLAAIKGVTWLLQKFPQLADQF 216
>AT1G71480.3 | Nuclear transport factor 2 (NTF2) family protein |
Chr1:26932079-26932787 FORWARD LENGTH=179 | 201606
Length = 179
Score = 183 bits (465), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 83/126 (65%), Positives = 105/126 (83%), Gaps = 1/126 (0%)
Query: 67 KVAVADVNGVGEISVRTASDIVKNFYGGINRNDLASVEDLIAENCVYEDLIFSSPFVGRK 126
K A A+ + V E + +AS++V +FY +N +DL+SV DLIA++CVYEDL+FSSPFVGRK
Sbjct: 55 KAATAN-DVVPETAPTSASEVVSSFYAAVNVHDLSSVTDLIAQDCVYEDLVFSSPFVGRK 113
Query: 127 AILDFFKKFTNSISRDLQFVIDDISEEDSLAIGVTWHLEWRGKPFPFSRGCSFYRLEIVN 186
AILDFF KF S S DLQFVIDDIS EDS A+GV+WHLEW+GK FPFS+GCSFYRLE+++
Sbjct: 114 AILDFFGKFIESTSTDLQFVIDDISTEDSSAVGVSWHLEWKGKNFPFSKGCSFYRLEVID 173
Query: 187 GKKQII 192
GK+QI+
Sbjct: 174 GKRQIV 179
>AT1G71480.2 | Nuclear transport factor 2 (NTF2) family protein |
Chr1:26932079-26932626 FORWARD LENGTH=152 | 201606
Length = 152
Score = 132 bits (332), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 78/98 (79%), Gaps = 1/98 (1%)
Query: 67 KVAVADVNGVGEISVRTASDIVKNFYGGINRNDLASVEDLIAENCVYEDLIFSSPFVGRK 126
K A A+ + V E + +AS++V +FY +N +DL+SV DLIA++CVYEDL+FSSPFVGRK
Sbjct: 55 KAATAN-DVVPETAPTSASEVVSSFYAAVNVHDLSSVTDLIAQDCVYEDLVFSSPFVGRK 113
Query: 127 AILDFFKKFTNSISRDLQFVIDDISEEDSLAIGVTWHL 164
AILDFF KF S S DLQFVIDDIS EDS A+GV+WHL
Sbjct: 114 AILDFFGKFIESTSTDLQFVIDDISTEDSSAVGVSWHL 151
>AT5G41470.1 | Nuclear transport factor 2 (NTF2) family protein |
Chr5:16593953-16595419 FORWARD LENGTH=277 | 201606
Length = 277
Score = 112 bits (281), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 93/178 (52%), Gaps = 1/178 (0%)
Query: 47 SVIRKTPKTLIEVPSSRNCIKVAVADVNGVGEISVRTASDIVKNFYGGINRNDLASVEDL 106
+ I+ P +I +SR I V+ D + + D V FY IN + +
Sbjct: 39 NAIKNDPIKMINKYASRRNIVVSCLDRPNSRPNQI-SGYDAVMKFYSSINEKNQDQLSSC 97
Query: 107 IAENCVYEDLIFSSPFVGRKAILDFFKKFTNSISRDLQFVIDDISEEDSLAIGVTWHLEW 166
I+ +C +D F PF G++ ++FF++ S+ ++++F ++++ E D + V WHLEW
Sbjct: 98 ISSDCFIDDFSFPKPFRGKQEAMEFFEELVKSMGQNVKFCVENVCEGDGHSAAVNWHLEW 157
Query: 167 RGKPFPFSRGCSFYRLEIVNGKKQIIYGRDSVEPSIKPGETALIAIKGVTWLLQRFPQ 224
+G+ PF+RGCSFY G+ I R +E IKPG L +K +T+L FP+
Sbjct: 158 KGRKIPFTRGCSFYEFIDEGGRLVIRNARILIESPIKPGGITLSLLKNITFLFDEFPK 215