BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000108.1_g3470.1
         (834 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G15450.1 | casein lytic proteinase B3 | Chr5:5014399-5018255 ...   172   4e-44
AT2G25140.1 | casein lytic proteinase B4 | Chr2:10697877-1070199...   107   2e-23

>AT5G15450.1 | casein lytic proteinase B3 | Chr5:5014399-5018255
           REVERSE LENGTH=968 | 201606
          Length = 968

 Score =  172 bits (437), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 85/136 (62%), Positives = 101/136 (74%), Gaps = 4/136 (2%)

Query: 402 FVVRCEA----GRITQQEFMEMAWQTIVSSPEAAKEKKQQIVESEHLMKAILEQKYGLAR 457
           FVVRCEA    GR+TQQEF EMAWQ+IVSSP+ AKE KQQIVE+EHLMKA+LEQK GLAR
Sbjct: 64  FVVRCEASSSNGRLTQQEFTEMAWQSIVSSPDVAKENKQQIVETEHLMKALLEQKNGLAR 123

Query: 458 LKFATTGIDNTRLLEAAEKLIPWHRKALGESTGSMLGTDLEDLIQRARDYKKKFNDSFVL 517
             F+  G+DNT++LEA EK I    K  G++ GSMLG DLE L QRAR +KK   DS+V 
Sbjct: 124 RIFSKIGVDNTKVLEATEKFIQRQPKVYGDAAGSMLGRDLEALFQRARQFKKDLKDSYVS 183

Query: 518 IGHSVLDFVQDQRSGE 533
           + H VL F  D+R G+
Sbjct: 184 VEHLVLAFADDKRFGK 199


>AT2G25140.1 | casein lytic proteinase B4 | Chr2:10697877-10701998
           REVERSE LENGTH=964 | 201606
          Length = 964

 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/125 (42%), Positives = 84/125 (67%), Gaps = 1/125 (0%)

Query: 409 GRITQQEFMEMAWQTIVSSPEAAKEKKQQIVESEHLMKAILEQKYGLARLKFATTGIDNT 468
            ++ Q EF EMAW+ ++++ +AA+E KQQIVESEHLMKA+LEQK G+AR  F   GIDN+
Sbjct: 81  AQVNQNEFTEMAWEGLINAFDAARESKQQIVESEHLMKALLEQKDGMARKIFTKAGIDNS 140

Query: 469 RLLEAAEKLIPWHRKALGESTGSMLGTDLEDLIQRARDYKKKFNDSFVLIGHSVLDFVQD 528
            +L+A +  I   +  + +++G  LG+ L  +++ A+ +KK   DS+V + H +L +  D
Sbjct: 141 SVLQATDLFIS-KQPTVSDASGQRLGSSLSVILENAKRHKKDMLDSYVSVEHFLLAYYSD 199

Query: 529 QRSGE 533
            R G+
Sbjct: 200 TRFGQ 204


Top