BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000108.1_g3490.1
         (1289 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ATMG00860.1 | DNA/RNA polymerases superfamily protein | ChrM:235...   115   2e-29

>ATMG00860.1 | DNA/RNA polymerases superfamily protein |
           ChrM:235916-236392 FORWARD LENGTH=158 | 201606
          Length = 158

 Score =  115 bits (289), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 60/133 (45%), Positives = 81/133 (60%), Gaps = 5/133 (3%)

Query: 602 LKHLRIVFQVLRENSLYVKREKCSFASTKVAFLGH---WIGEGKIWMDQKKIQAIQGWEE 658
           + HL +V Q+  ++  Y  R+KC+F   ++A+LGH     GEG +  D  K++A+ GW E
Sbjct: 1   MNHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEG-VSADPAKLEAMVGWPE 59

Query: 659 PTKVTQLRSFLGLVNYYRRFIEGYSKRAAPLTDLLKKNQAWLWTDKCQAAFDDLKQAVMK 718
           P   T+LR FLGL  YYRRF++ Y K   PLT+LLKKN    WT+    AF  LK AV  
Sbjct: 60  PKNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSL-KWTEMAALAFKALKGAVTT 118

Query: 719 EPVLSLPDHTKPY 731
            PVL+LPD   P+
Sbjct: 119 LPVLALPDLKLPF 131


Top