BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000108.1_g3510.1
         (103 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G60245.1 | Zinc-binding ribosomal protein family protein | Ch...   172   1e-57
AT3G10950.1 | Zinc-binding ribosomal protein family protein | Ch...   169   2e-56

>AT3G60245.1 | Zinc-binding ribosomal protein family protein |
           Chr3:22268803-22269750 FORWARD LENGTH=92 | 201606
          Length = 92

 Score =  172 bits (437), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 84/90 (93%), Positives = 88/90 (97%)

Query: 14  KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHAKYFCEFCGKYAVKRKAVGIWGCKDCGK 73
           KRTKK GIVGKYGTRYGAS+RKQIKKMEVSQH+KYFCEFCGKY VKRKAVGIWGCKDCGK
Sbjct: 3   KRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDCGK 62

Query: 74  VKAGGAYTLNTAAAVTVRSTIRRLREQIEG 103
           VKAGGAYT+NTA+AVTVRSTIRRLREQIEG
Sbjct: 63  VKAGGAYTMNTASAVTVRSTIRRLREQIEG 92


>AT3G10950.1 | Zinc-binding ribosomal protein family protein |
           Chr3:3423893-3424566 FORWARD LENGTH=92 | 201606
          Length = 92

 Score =  169 bits (428), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 83/90 (92%), Positives = 86/90 (95%)

Query: 13  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHAKYFCEFCGKYAVKRKAVGIWGCKDCG 72
           TKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH KYFCEFCGKY+VKRK VGIWGCKDCG
Sbjct: 2   TKRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDCG 61

Query: 73  KVKAGGAYTLNTAAAVTVRSTIRRLREQIE 102
           KVKAGGAYT+NTA+AVTVRSTIRRLREQ E
Sbjct: 62  KVKAGGAYTMNTASAVTVRSTIRRLREQTE 91

Top