BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000109.1_g0010.1
(290 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00860.1 | DNA/RNA polymerases superfamily protein | ChrM:235... 73 2e-15
>ATMG00860.1 | DNA/RNA polymerases superfamily protein |
ChrM:235916-236392 FORWARD LENGTH=158 | 201606
Length = 158
Score = 72.8 bits (177), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 1 DESKVEAIRSWPVLATQSDVRSFHGLASFYRRFVKKNFSTVVAPITECLKNDQFERSNAA 60
D +K+EA+ WP +++R F GL +YRRFVK N+ +V P+TE LK + + + A
Sbjct: 47 DPAKLEAMVGWPEPKNTTELRGFLGLTGYYRRFVK-NYGKIVRPLTELLKKNSLKWTEMA 105
Query: 61 QKAFEVVKQKLCEAPILALPDFNQVF 86
AF+ +K + P+LALPD F
Sbjct: 106 ALAFKALKGAVTTLPVLALPDLKLPF 131