BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000112.1_g0010.1
(220 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G43860.2 | glycosyl hydrolase 9A4 | Chr3:15707183-15709438 FO... 303 e-102
AT3G43860.1 | glycosyl hydrolase 9A4 | Chr3:15707183-15709438 FO... 303 e-102
AT4G11050.2 | glycosyl hydrolase 9C3 | Chr4:6747850-6751311 REVE... 214 9e-67
AT1G71380.1 | cellulase 3 | Chr1:26899989-26901749 REVERSE LENGT... 212 3e-66
AT4G11050.3 | glycosyl hydrolase 9C3 | Chr4:6747498-6751311 REVE... 215 3e-66
>AT3G43860.2 | glycosyl hydrolase 9A4 | Chr3:15707183-15709438
FORWARD LENGTH=486 | 201606
Length = 486
Score = 303 bits (777), Expect = e-102, Method: Compositional matrix adjust.
Identities = 151/206 (73%), Positives = 177/206 (85%), Gaps = 4/206 (1%)
Query: 6 LTAIILALFVISNNGFLMVVNGDF-NYKDALTKSIIFLEAQRSGKLPPNNRVPWRGDSGL 64
+ +++L L+ I N ++ VNG F NYKDALTKS+IFLEAQRSGKLPPNNRVPWRGDS L
Sbjct: 12 IRSMLLGLYGIIN---IVCVNGTFINYKDALTKSLIFLEAQRSGKLPPNNRVPWRGDSAL 68
Query: 65 DDGKEAHVDLTGGYYDAGDNVKYGLPMAFTVTTLAWTALFYHSELQSTGELQNVHAAIRW 124
DDGK +VDL+GGYYDAGDNVKYGLPMAFT+TTLAW+ + Y EL++TGEL+N AAIRW
Sbjct: 69 DDGKLVNVDLSGGYYDAGDNVKYGLPMAFTITTLAWSTITYEKELRATGELENARAAIRW 128
Query: 125 GTDYFLKCSIKKNRLYVQVGDPVADHQCWARPENMNTPRTVLKIDESRPGTEIAAETAAA 184
GTDYFLKC+ +KNRLYVQVGDP ADHQCWARPENM TPRTVL+I + PGTEIAAE AAA
Sbjct: 129 GTDYFLKCASRKNRLYVQVGDPNADHQCWARPENMKTPRTVLEISDKVPGTEIAAEAAAA 188
Query: 185 MAASSLVFRGSDYQYSRRLVNKAKLV 210
AASS+VFR D++Y+RRL+NKAKL+
Sbjct: 189 FAASSIVFRHVDHKYARRLLNKAKLL 214
>AT3G43860.1 | glycosyl hydrolase 9A4 | Chr3:15707183-15709438
FORWARD LENGTH=486 | 201606
Length = 486
Score = 303 bits (777), Expect = e-102, Method: Compositional matrix adjust.
Identities = 151/206 (73%), Positives = 177/206 (85%), Gaps = 4/206 (1%)
Query: 6 LTAIILALFVISNNGFLMVVNGDF-NYKDALTKSIIFLEAQRSGKLPPNNRVPWRGDSGL 64
+ +++L L+ I N ++ VNG F NYKDALTKS+IFLEAQRSGKLPPNNRVPWRGDS L
Sbjct: 12 IRSMLLGLYGIIN---IVCVNGTFINYKDALTKSLIFLEAQRSGKLPPNNRVPWRGDSAL 68
Query: 65 DDGKEAHVDLTGGYYDAGDNVKYGLPMAFTVTTLAWTALFYHSELQSTGELQNVHAAIRW 124
DDGK +VDL+GGYYDAGDNVKYGLPMAFT+TTLAW+ + Y EL++TGEL+N AAIRW
Sbjct: 69 DDGKLVNVDLSGGYYDAGDNVKYGLPMAFTITTLAWSTITYEKELRATGELENARAAIRW 128
Query: 125 GTDYFLKCSIKKNRLYVQVGDPVADHQCWARPENMNTPRTVLKIDESRPGTEIAAETAAA 184
GTDYFLKC+ +KNRLYVQVGDP ADHQCWARPENM TPRTVL+I + PGTEIAAE AAA
Sbjct: 129 GTDYFLKCASRKNRLYVQVGDPNADHQCWARPENMKTPRTVLEISDKVPGTEIAAEAAAA 188
Query: 185 MAASSLVFRGSDYQYSRRLVNKAKLV 210
AASS+VFR D++Y+RRL+NKAKL+
Sbjct: 189 FAASSIVFRHVDHKYARRLLNKAKLL 214
>AT4G11050.2 | glycosyl hydrolase 9C3 | Chr4:6747850-6751311 REVERSE
LENGTH=542 | 201606
Length = 542
Score = 214 bits (546), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 107/178 (60%), Positives = 131/178 (73%)
Query: 30 NYKDALTKSIIFLEAQRSGKLPPNNRVPWRGDSGLDDGKEAHVDLTGGYYDAGDNVKYGL 89
+YK AL+KSI+F EAQRSG LPPN RV WR SGL DGK + VDL GGYYDAGDNVK+GL
Sbjct: 26 DYKQALSKSILFFEAQRSGHLPPNQRVSWRSHSGLYDGKSSGVDLVGGYYDAGDNVKFGL 85
Query: 90 PMAFTVTTLAWTALFYHSELQSTGELQNVHAAIRWGTDYFLKCSIKKNRLYVQVGDPVAD 149
PMAFTVTT+ W+ + Y +L+S GEL + A++WGTDYF+K + N LY +VGD +D
Sbjct: 86 PMAFTVTTMCWSIIEYGGQLESNGELGHAIDAVKWGTDYFIKAHPEPNVLYGEVGDGKSD 145
Query: 150 HQCWARPENMNTPRTVLKIDESRPGTEIAAETAAAMAASSLVFRGSDYQYSRRLVNKA 207
H CW RPE M T R KID + PG+++A ETAAAMAA+S+VFR SD YS L+ A
Sbjct: 146 HYCWQRPEEMTTDRRAYKIDRNNPGSDLAGETAAAMAAASIVFRRSDPSYSAELLRHA 203
>AT1G71380.1 | cellulase 3 | Chr1:26899989-26901749 REVERSE
LENGTH=484 | 201606
Length = 484
Score = 212 bits (539), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 113/210 (53%), Positives = 147/210 (70%), Gaps = 8/210 (3%)
Query: 6 LTAIILALFVISNNGFLMVVNGDFN--YKDALTKSIIFLEAQRSGKLPPNNRVPWRGDSG 63
+T++ + + S+ L++ NGD N YK+AL+KS++F + QRSG LP ++ WR SG
Sbjct: 1 MTSLFFFVLLFSS---LLISNGDANPNYKEALSKSLLFFQGQRSGPLPRGQQISWRASSG 57
Query: 64 LDDGKEAHVDLTGGYYDAGDNVKYGLPMAFTVTTLAWTALFYHSELQSTGELQNVHAAIR 123
L DG AHVDLTGGYYDAGDNVK+ LPMAFT T L+W+AL Y + EL+N IR
Sbjct: 58 LSDGSAAHVDLTGGYYDAGDNVKFNLPMAFTTTMLSWSALEYGKRMGP--ELENARVNIR 115
Query: 124 WGTDYFLKCS-IKKNRLYVQVGDPVADHQCWARPENMNTPRTVLKIDESRPGTEIAAETA 182
W TDY LKC+ +LYV VGDP DH+CW RPE+M+TPRTV + S PG+++AAETA
Sbjct: 116 WATDYLLKCARATPGKLYVGVGDPNVDHKCWERPEDMDTPRTVYSVSASNPGSDVAAETA 175
Query: 183 AAMAASSLVFRGSDYQYSRRLVNKAKLVSQ 212
AA+AA+S+VFR D +YSR L+ AK V Q
Sbjct: 176 AALAAASMVFRKVDSKYSRLLLATAKDVMQ 205
>AT4G11050.3 | glycosyl hydrolase 9C3 | Chr4:6747498-6751311 REVERSE
LENGTH=625 | 201606
Length = 625
Score = 215 bits (547), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 107/178 (60%), Positives = 131/178 (73%)
Query: 30 NYKDALTKSIIFLEAQRSGKLPPNNRVPWRGDSGLDDGKEAHVDLTGGYYDAGDNVKYGL 89
+YK AL+KSI+F EAQRSG LPPN RV WR SGL DGK + VDL GGYYDAGDNVK+GL
Sbjct: 26 DYKQALSKSILFFEAQRSGHLPPNQRVSWRSHSGLYDGKSSGVDLVGGYYDAGDNVKFGL 85
Query: 90 PMAFTVTTLAWTALFYHSELQSTGELQNVHAAIRWGTDYFLKCSIKKNRLYVQVGDPVAD 149
PMAFTVTT+ W+ + Y +L+S GEL + A++WGTDYF+K + N LY +VGD +D
Sbjct: 86 PMAFTVTTMCWSIIEYGGQLESNGELGHAIDAVKWGTDYFIKAHPEPNVLYGEVGDGKSD 145
Query: 150 HQCWARPENMNTPRTVLKIDESRPGTEIAAETAAAMAASSLVFRGSDYQYSRRLVNKA 207
H CW RPE M T R KID + PG+++A ETAAAMAA+S+VFR SD YS L+ A
Sbjct: 146 HYCWQRPEEMTTDRRAYKIDRNNPGSDLAGETAAAMAAASIVFRRSDPSYSAELLRHA 203