BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000112.1_g0060.1
(308 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G06005.3 | FRIGIDA interacting protein 1 | Chr2:2333072-23360... 302 e-103
AT2G06005.2 | FRIGIDA interacting protein 1 | Chr2:2333023-23360... 301 e-102
AT2G06005.1 | FRIGIDA interacting protein 1 | Chr2:2332583-23360... 301 e-101
AT5G20580.2 | TMEM192 family protein | Chr5:6958790-6962592 REVE... 277 5e-92
AT5G20580.1 | TMEM192 family protein | Chr5:6958790-6962592 REVE... 277 8e-92
>AT2G06005.3 | FRIGIDA interacting protein 1 | Chr2:2333072-2336022
FORWARD LENGTH=262 | 201606
Length = 262
Score = 302 bits (773), Expect = e-103, Method: Compositional matrix adjust.
Identities = 151/201 (75%), Positives = 173/201 (86%), Gaps = 1/201 (0%)
Query: 104 CGLGTALMLLVMVWQPEFQILSLCTFLRIIVSVEALCAGSSMGLYIGSVHQYNSLNSQPD 163
GTA MLLV+VW+P+ ILS+ + RII+ VEA+ AG MGLYIG VHQYNS+NS+PD
Sbjct: 28 AAYGTAAMLLVIVWRPQIHILSISSLQRIIMLVEAVGAGFFMGLYIGYVHQYNSVNSRPD 87
Query: 164 VLNSLYSALQPSSSLEDLRYHEGGRLSDQQMALLQYQRENIHYLSEEILRLQECLSKYER 223
VL SLYS LQPSSS+E LRY+EG RLSDQQ ALLQYQREN+H+LSEEIL LQE LSKYE+
Sbjct: 88 VLKSLYSPLQPSSSMEGLRYYEG-RLSDQQTALLQYQRENLHFLSEEILCLQEKLSKYEQ 146
Query: 224 SDDGSTPQVDLAHLLAARDQELRTLSAEMNQVQSELRLARNLIAKRDSDVNHIQITNNQY 283
SDDGSTPQVDLAHLLAARDQELRTLSAEMNQ+QSELRLAR+LIA+RD++V + TNNQY
Sbjct: 147 SDDGSTPQVDLAHLLAARDQELRTLSAEMNQLQSELRLARSLIAERDAEVQRVNSTNNQY 206
Query: 284 VEENERLRAILGEWSTRAAKV 304
+EENERLRAIL EWS RAA +
Sbjct: 207 IEENERLRAILSEWSMRAANL 227
Score = 104 bits (260), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 67/97 (69%), Gaps = 20/97 (20%)
Query: 19 WLYTQILRLQECLSKYERSDDGSTPQ--------------------MNQVQSELRLARNL 58
+L +IL LQE LSKYE+SDDGSTPQ MNQ+QSELRLAR+L
Sbjct: 129 FLSEEILCLQEKLSKYEQSDDGSTPQVDLAHLLAARDQELRTLSAEMNQLQSELRLARSL 188
Query: 59 IAKRDSVVNHIQTTNNQYVEENERLRAILGEWSTRAA 95
IA+RD+ V + +TNNQY+EENERLRAIL EWS RAA
Sbjct: 189 IAERDAEVQRVNSTNNQYIEENERLRAILSEWSMRAA 225
>AT2G06005.2 | FRIGIDA interacting protein 1 | Chr2:2333023-2336022
FORWARD LENGTH=295 | 201606
Length = 295
Score = 301 bits (771), Expect = e-102, Method: Compositional matrix adjust.
Identities = 151/201 (75%), Positives = 173/201 (86%), Gaps = 1/201 (0%)
Query: 104 CGLGTALMLLVMVWQPEFQILSLCTFLRIIVSVEALCAGSSMGLYIGSVHQYNSLNSQPD 163
GTA MLLV+VW+P+ ILS+ + RII+ VEA+ AG MGLYIG VHQYNS+NS+PD
Sbjct: 61 AAYGTAAMLLVIVWRPQIHILSISSLQRIIMLVEAVGAGFFMGLYIGYVHQYNSVNSRPD 120
Query: 164 VLNSLYSALQPSSSLEDLRYHEGGRLSDQQMALLQYQRENIHYLSEEILRLQECLSKYER 223
VL SLYS LQPSSS+E LRY+EG RLSDQQ ALLQYQREN+H+LSEEIL LQE LSKYE+
Sbjct: 121 VLKSLYSPLQPSSSMEGLRYYEG-RLSDQQTALLQYQRENLHFLSEEILCLQEKLSKYEQ 179
Query: 224 SDDGSTPQVDLAHLLAARDQELRTLSAEMNQVQSELRLARNLIAKRDSDVNHIQITNNQY 283
SDDGSTPQVDLAHLLAARDQELRTLSAEMNQ+QSELRLAR+LIA+RD++V + TNNQY
Sbjct: 180 SDDGSTPQVDLAHLLAARDQELRTLSAEMNQLQSELRLARSLIAERDAEVQRVNSTNNQY 239
Query: 284 VEENERLRAILGEWSTRAAKV 304
+EENERLRAIL EWS RAA +
Sbjct: 240 IEENERLRAILSEWSMRAANL 260
Score = 104 bits (260), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 67/97 (69%), Gaps = 20/97 (20%)
Query: 19 WLYTQILRLQECLSKYERSDDGSTPQ--------------------MNQVQSELRLARNL 58
+L +IL LQE LSKYE+SDDGSTPQ MNQ+QSELRLAR+L
Sbjct: 162 FLSEEILCLQEKLSKYEQSDDGSTPQVDLAHLLAARDQELRTLSAEMNQLQSELRLARSL 221
Query: 59 IAKRDSVVNHIQTTNNQYVEENERLRAILGEWSTRAA 95
IA+RD+ V + +TNNQY+EENERLRAIL EWS RAA
Sbjct: 222 IAERDAEVQRVNSTNNQYIEENERLRAILSEWSMRAA 258
>AT2G06005.1 | FRIGIDA interacting protein 1 | Chr2:2332583-2336022
FORWARD LENGTH=355 | 201606
Length = 355
Score = 301 bits (770), Expect = e-101, Method: Compositional matrix adjust.
Identities = 151/201 (75%), Positives = 173/201 (86%), Gaps = 1/201 (0%)
Query: 104 CGLGTALMLLVMVWQPEFQILSLCTFLRIIVSVEALCAGSSMGLYIGSVHQYNSLNSQPD 163
GTA MLLV+VW+P+ ILS+ + RII+ VEA+ AG MGLYIG VHQYNS+NS+PD
Sbjct: 121 AAYGTAAMLLVIVWRPQIHILSISSLQRIIMLVEAVGAGFFMGLYIGYVHQYNSVNSRPD 180
Query: 164 VLNSLYSALQPSSSLEDLRYHEGGRLSDQQMALLQYQRENIHYLSEEILRLQECLSKYER 223
VL SLYS LQPSSS+E LRY+EG RLSDQQ ALLQYQREN+H+LSEEIL LQE LSKYE+
Sbjct: 181 VLKSLYSPLQPSSSMEGLRYYEG-RLSDQQTALLQYQRENLHFLSEEILCLQEKLSKYEQ 239
Query: 224 SDDGSTPQVDLAHLLAARDQELRTLSAEMNQVQSELRLARNLIAKRDSDVNHIQITNNQY 283
SDDGSTPQVDLAHLLAARDQELRTLSAEMNQ+QSELRLAR+LIA+RD++V + TNNQY
Sbjct: 240 SDDGSTPQVDLAHLLAARDQELRTLSAEMNQLQSELRLARSLIAERDAEVQRVNSTNNQY 299
Query: 284 VEENERLRAILGEWSTRAAKV 304
+EENERLRAIL EWS RAA +
Sbjct: 300 IEENERLRAILSEWSMRAANL 320
Score = 104 bits (260), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 67/97 (69%), Gaps = 20/97 (20%)
Query: 19 WLYTQILRLQECLSKYERSDDGSTPQ--------------------MNQVQSELRLARNL 58
+L +IL LQE LSKYE+SDDGSTPQ MNQ+QSELRLAR+L
Sbjct: 222 FLSEEILCLQEKLSKYEQSDDGSTPQVDLAHLLAARDQELRTLSAEMNQLQSELRLARSL 281
Query: 59 IAKRDSVVNHIQTTNNQYVEENERLRAILGEWSTRAA 95
IA+RD+ V + +TNNQY+EENERLRAIL EWS RAA
Sbjct: 282 IAERDAEVQRVNSTNNQYIEENERLRAILSEWSMRAA 318
>AT5G20580.2 | TMEM192 family protein | Chr5:6958790-6962592 REVERSE
LENGTH=348 | 201606
Length = 348
Score = 277 bits (709), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 139/198 (70%), Positives = 165/198 (83%), Gaps = 2/198 (1%)
Query: 107 GTALMLLVMVWQPEFQILSLCTFLRIIVSVEALCAGSSMGLYIGSVHQYNSLNSQPDVLN 166
GTA MLL M W+P +L + T R I+SVEA+ A S M +++G V QYNS+NSQPDVLN
Sbjct: 125 GTASMLLFMEWRPYVSVLPIFTVQRFIMSVEAISAASFMIVFVGYVRQYNSVNSQPDVLN 184
Query: 167 SLYSALQPSSSLEDLRYHEGGRLSDQQMALLQYQRENIHYLSEEILRLQECLSKYERSDD 226
SLYS LQP++ LE LRYHE GRLSDQQMALLQYQREN+HYLSEEILRLQE LSKYE ++
Sbjct: 185 SLYSPLQPAA-LEGLRYHEAGRLSDQQMALLQYQRENLHYLSEEILRLQESLSKYE-TNG 242
Query: 227 GSTPQVDLAHLLAARDQELRTLSAEMNQVQSELRLARNLIAKRDSDVNHIQITNNQYVEE 286
STPQVDLAHL+A RDQELRTLSAE++Q+ SEL LAR+LI++RD ++ H++ TNNQYV E
Sbjct: 243 SSTPQVDLAHLVATRDQELRTLSAEVDQLHSELNLARSLISERDREIQHVRNTNNQYVAE 302
Query: 287 NERLRAILGEWSTRAAKV 304
NERLRAILGEWS RAAK+
Sbjct: 303 NERLRAILGEWSMRAAKL 320
Score = 91.7 bits (226), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Query: 19 WLYTQILRLQECLSKYERSDDGSTPQMN--------------------QVQSELRLARNL 58
+L +ILRLQE LSKYE ++ STPQ++ Q+ SEL LAR+L
Sbjct: 223 YLSEEILRLQESLSKYE-TNGSSTPQVDLAHLVATRDQELRTLSAEVDQLHSELNLARSL 281
Query: 59 IAKRDSVVNHIQTTNNQYVEENERLRAILGEWSTRAAK 96
I++RD + H++ TNNQYV ENERLRAILGEWS RAAK
Sbjct: 282 ISERDREIQHVRNTNNQYVAENERLRAILGEWSMRAAK 319
>AT5G20580.1 | TMEM192 family protein | Chr5:6958790-6962592 REVERSE
LENGTH=348 | 201606
Length = 348
Score = 277 bits (708), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 139/198 (70%), Positives = 165/198 (83%), Gaps = 2/198 (1%)
Query: 107 GTALMLLVMVWQPEFQILSLCTFLRIIVSVEALCAGSSMGLYIGSVHQYNSLNSQPDVLN 166
GTA MLL M W+P +L + T R I+SVEA+ A S M +++G V QYNS+NSQPDVLN
Sbjct: 125 GTASMLLFMEWRPYVSVLPIFTVQRFIMSVEAISAASFMIVFVGYVRQYNSVNSQPDVLN 184
Query: 167 SLYSALQPSSSLEDLRYHEGGRLSDQQMALLQYQRENIHYLSEEILRLQECLSKYERSDD 226
SLYS LQP++ LE LRYHE GRLSDQQMALLQYQREN+HYLSEEILRLQE LSKYE ++
Sbjct: 185 SLYSPLQPAA-LEGLRYHEAGRLSDQQMALLQYQRENLHYLSEEILRLQESLSKYE-TNG 242
Query: 227 GSTPQVDLAHLLAARDQELRTLSAEMNQVQSELRLARNLIAKRDSDVNHIQITNNQYVEE 286
STPQVDLAHL+A RDQELRTLSAE++Q+ SEL LAR+LI++RD ++ H++ TNNQYV E
Sbjct: 243 SSTPQVDLAHLVATRDQELRTLSAEVDQLHSELNLARSLISERDREIQHVRNTNNQYVAE 302
Query: 287 NERLRAILGEWSTRAAKV 304
NERLRAILGEWS RAAK+
Sbjct: 303 NERLRAILGEWSMRAAKL 320
Score = 91.7 bits (226), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Query: 19 WLYTQILRLQECLSKYERSDDGSTPQMN--------------------QVQSELRLARNL 58
+L +ILRLQE LSKYE ++ STPQ++ Q+ SEL LAR+L
Sbjct: 223 YLSEEILRLQESLSKYE-TNGSSTPQVDLAHLVATRDQELRTLSAEVDQLHSELNLARSL 281
Query: 59 IAKRDSVVNHIQTTNNQYVEENERLRAILGEWSTRAAK 96
I++RD + H++ TNNQYV ENERLRAILGEWS RAAK
Sbjct: 282 ISERDREIQHVRNTNNQYVAENERLRAILGEWSMRAAK 319