BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000112.1_g0080.1
(342 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 100 5e-23
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 52 5e-07
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 100 bits (249), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 157/348 (45%), Gaps = 49/348 (14%)
Query: 12 DLHDIGYSGYPYTWTNKQFKGNLIQQRLDRSLVNHKWLTNFSHSKLTHLPTLGSDHSHIL 71
DL DI G YTW+N Q N I ++LDR++ N W ++F + + SDHS +
Sbjct: 260 DLVDIPSRGVHYTWSNHQ-DDNPIIRKLDRAIANGDWFSSFPSAIAVFELSGVSDHSPCI 318
Query: 72 LTTKHNSSLGRKPFKFIRTWMSHPKCGHFIKTNW----------LSLSNHIQAKLNSLAI 121
+ ++ +K F++ +HP + W SL H++A +
Sbjct: 319 IILENLPKRSKKCFRYFSFLSTHPTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKL 378
Query: 122 RLSKWNKEVFGHLDTNIKQLTNKIQTIQDPVVFKETYS--QIETLLLQQ--------ESL 171
N++ FG++ K+ + +++IQ ++ + S ++E + ++ ES
Sbjct: 379 L----NRQGFGNIQHKTKEALDSLESIQSQLLTNPSDSLFRVEHVARKKWNFFAAALESF 434
Query: 172 WKEKSKIANINLGDRNTQYFHAKAATRNGKNQIHSIKKDDNSWTNDEAEISSI---FSNH 228
+++KS+I + GD NT++FH KN I ++ DD+ + ++ + + H
Sbjct: 435 YRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTH 494
Query: 229 LLNISTSVGSNLSLNLL---------ECFSSQLTTLQNDSLIATPIMEEIRKATFSLMPG 279
LL + + + S+ + + +S+L+ L +D +EI A F++
Sbjct: 495 LLGSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSD--------KEITAAVFAMPRN 546
Query: 280 AAPGPDGYPPFFYQANWDTVQEDIKDMVTHFFSTAILL----ASLITL 323
APGPD + F+ +W V++ V FF T LL A+ ITL
Sbjct: 547 KAPGPDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITL 594
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 12/181 (6%)
Query: 12 DLHDIGYSGYPYTWTNKQFKGNLIQQRLDRSLVNHKWLTNFSHSKLTHLPTLGSDHSHIL 71
DL D+ G YTW+N Q + N I ++LDR++VN WL F + P SDH+ +
Sbjct: 161 DLVDLPCRGVLYTWSNHQ-QDNPILRKLDRAIVNGCWLATFPTASAIFDPPSDSDHAACM 219
Query: 72 LTTKHNSSLG-RKPFKFIRTWMSHPKCGHFIKTNWLSLSNHIQAKLNSLAIRLSKWNKEV 130
+ ++ L +K FK+ +HP I W + + + SL L + K
Sbjct: 220 VILNNSPPLSKKKSFKYFSFLSTHPDFISSILAAWQK-EIAVGSFMFSLGELLKEAKKAC 278
Query: 131 FGHLDTNIKQLTN-KIQTIQDPVVFKETYSQIET-----LLLQQESLWKEKSKIANINLG 184
G N + +N + Q + +P F + ES +K+KS+I + G
Sbjct: 279 RG---LNRRGFSNIQAQLMSNPSDFLFRAEHVARKNWNFFAAALESFYKQKSRIKWLKEG 335
Query: 185 D 185
D
Sbjct: 336 D 336