BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000112.1_g0090.1
         (128 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G29090.1 | Ribonuclease H-like superfamily protein | Chr4:143...    43   2e-05

>AT4G29090.1 | Ribonuclease H-like superfamily protein |
           Chr4:14333528-14335255 FORWARD LENGTH=575 | 201606
          Length = 575

 Score = 42.7 bits (99), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 17/105 (16%)

Query: 28  AIFKAFQWAL----KKKIVYLHIESDNLNIVQKLNKESIDISWQSEK-IIEKVQQLEADF 82
           A  +A +WA+    + +  Y+  ESD+  +++ LN + I   W S K  I+ +Q+L + F
Sbjct: 473 AELEAMRWAVLSLSRFQYNYVIFESDSQVLIEILNNDEI---WPSLKPTIQDLQRLLSQF 529

Query: 83  TKVLYTHIPREGNYKADHLAKWSRRNKGTWMWLSLLDLPQELYKL 127
           T+V +  IPREGN  A+ +A+ S         LS L+   +LY +
Sbjct: 530 TEVKFVFIPREGNTLAERVARES---------LSFLNYDPKLYSI 565

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