BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000112.1_g0150.1
(142 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G54120.1 | hypothetical protein | Chr1:20207078-20207452 FORW... 73 4e-17
AT3G14060.1 | hypothetical protein | Chr3:4657174-4657551 REVERS... 59 9e-12
>AT1G54120.1 | hypothetical protein | Chr1:20207078-20207452 FORWARD
LENGTH=124 | 201606
Length = 124
Score = 72.8 bits (177), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 61/84 (72%), Gaps = 6/84 (7%)
Query: 48 IQLGGKKT---RNGFTLMRLLKKMKLKWLKLQYLCTLKKLKKLYYSIIKDLIEAASGSEL 104
++LGGK + R GF+L +++++MKL+WLKL Y+ +KK+K Y +++K+ ++A G+EL
Sbjct: 30 VRLGGKNSAVSRGGFSLKKMVRRMKLRWLKLHYVRVVKKIKVFYRNLVKEFVDA--GAEL 87
Query: 105 EPVPQRIVME-NYFSVPVMGVSLA 127
E + QR+ +E F+VP +G+S +
Sbjct: 88 EAIQQRMAVEAAAFAVPGLGLSFS 111
>AT3G14060.1 | hypothetical protein | Chr3:4657174-4657551 REVERSE
LENGTH=125 | 201606
Length = 125
Score = 58.9 bits (141), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 62/97 (63%), Gaps = 8/97 (8%)
Query: 34 KKLIFLKRRRSIPSIQLGGKKT--RNGFTLMRLLKKMKLKWLKLQYLCTLKKLKKLYYSI 91
++ I+L+RR+ ++LGGK + R F+L +++ +M+LKWL+L Y+ +KK+K Y +I
Sbjct: 20 RRKIYLRRRKP-QVVRLGGKNSTPRGSFSLKKVVTRMRLKWLRLYYVRLVKKIKAYYRTI 78
Query: 92 IKDLIEAASGSELEPVPQRIVMEN-YFSVPVMGVSLA 127
+K+ EA + + + QR+ +E F+ P +G+S
Sbjct: 79 VKEFEEAGAAT----IQQRMTVETAAFAAPGLGLSFC 111