BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000112.1_g0200.1
(179 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G52990.2 | thioredoxin family protein | Chr1:19741201-1974344... 62 8e-12
AT2G13980.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 61 1e-11
AT1G52990.1 | thioredoxin family protein | Chr1:19740503-1974344... 62 2e-11
AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 60 6e-11
AT4G29090.1 | Ribonuclease H-like superfamily protein | Chr4:143... 59 2e-10
>AT1G52990.2 | thioredoxin family protein | Chr1:19741201-19743449
REVERSE LENGTH=243 | 201606
Length = 243
Score = 62.0 bits (149), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
Query: 24 PQGYFKINYDATWDKASLLTYIAICISDSTGRQLAKGSTKLLSR-TVDEGESKACYFGIE 82
P K NYDA+ + +++ + I +S G L G K R T +E E A + I+
Sbjct: 44 PSCRVKCNYDASHHEGDVVSGLGWLIRNSQGTVLECGMGKFQGRMTPEEAECSALIWAIQ 103
Query: 83 WAKQHNINRVILEGDSMNVSNFLNGRQNSIHWTAKHVLKKVKSIASSLDQVSFLFVNRQF 142
+VI EGD+ NV+ +N + ++ KH L +KS S F+F +R+
Sbjct: 104 ATSAFGYTKVIFEGDNSNVNRLINTKSDNPR--LKHYLDTIKSWIPSFTSTEFIFTHREQ 161
Query: 143 NSLAHNLAVNSRKTKT--CIFNC 163
N A L + K+ T +FNC
Sbjct: 162 NQCADTLVKKAIKSSTQWSLFNC 184
>AT2G13980.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:5869853-5870368 REVERSE
LENGTH=171 | 201606
Length = 171
Score = 60.8 bits (146), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 18 TKWSPPPQGYFKINYDATWDKASLLTYIAICISDSTGRQLAKGSTKLL-SRTVDEGESKA 76
TKW PP + K NYDA ++ +L + I + G GS +L + T E E+KA
Sbjct: 11 TKWKAPPDTHIKCNYDAGFNVQNLDSTARWIIRNHDGIAQHWGSLQLDNTSTPLEAETKA 70
Query: 77 CYFGIEWAKQHNINRVILEGDSMNVSNFLNGRQNSIHWTAKHVLKKVKSIASSLDQVSFL 136
++ RVI+EGD ++N ++G + H ++L ++ A V F
Sbjct: 71 LLAALQQTWIRGYLRVIMEGDCETLTNLVSGSSSHNH--LANLLDDIRIWAKKFSNVQFS 128
Query: 137 FVNRQFNSLAHNLA---VNSRKTKTCIFNCLSSCTLS------HCNIF 175
FV R N +AH LA NS TC ++ SCTL +CN F
Sbjct: 129 FVRRGGNKVAHELAKLGCNS----TCFYS--DSCTLPIWLHQHYCNDF 170
>AT1G52990.1 | thioredoxin family protein | Chr1:19740503-19743449
REVERSE LENGTH=313 | 201606
Length = 313
Score = 62.0 bits (149), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
Query: 24 PQGYFKINYDATWDKASLLTYIAICISDSTGRQLAKGSTKLLSR-TVDEGESKACYFGIE 82
P K NYDA+ + +++ + I +S G L G K R T +E E A + I+
Sbjct: 44 PSCRVKCNYDASHHEGDVVSGLGWLIRNSQGTVLECGMGKFQGRMTPEEAECSALIWAIQ 103
Query: 83 WAKQHNINRVILEGDSMNVSNFLNGRQNSIHWTAKHVLKKVKSIASSLDQVSFLFVNRQF 142
+VI EGD+ NV+ +N + ++ KH L +KS S F+F +R+
Sbjct: 104 ATSAFGYTKVIFEGDNSNVNRLINTKSDNPR--LKHYLDTIKSWIPSFTSTEFIFTHREQ 161
Query: 143 NSLAHNLAVNSRKTKT--CIFNC 163
N A L + K+ T +FNC
Sbjct: 162 NQCADTLVKKAIKSSTQWSLFNC 184
>AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr5:25967824-25968615 FORWARD
LENGTH=263 | 201606
Length = 263
Score = 59.7 bits (143), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 3/142 (2%)
Query: 18 TKWSPPPQGYFKINYDATWDKASLLTYIAICISDSTGRQLAKGSTKLLSR-TVDEGESKA 76
TKWSPP + K NYDA+ + + ++ + + +S G + G K R T +E E
Sbjct: 103 TKWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECST 162
Query: 77 CYFGIEWAKQHNINRVILEGDSMNVSNFLNGRQNSIHWTAKHVLKKVKSIASSLDQVSFL 136
+ I+ + +VI EGD+ ++ +N + ++ +H L ++S S + + F
Sbjct: 163 LIWAIQASYGFGHKKVIFEGDNQTITRMINTKSSNPR--LQHFLDTIQSWIPSFESIEFS 220
Query: 137 FVNRQFNSLAHNLAVNSRKTKT 158
F +R+ N A LA + K T
Sbjct: 221 FKHREQNGCADFLAKQAIKENT 242
>AT4G29090.1 | Ribonuclease H-like superfamily protein |
Chr4:14333528-14335255 FORWARD LENGTH=575 | 201606
Length = 575
Score = 58.9 bits (141), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 19 KWSPPPQGYFKINYDATWDKASLLTYIAICISDSTGRQLAKGSTKLLS-RTVDEGESKAC 77
+W PPP + K N DATW++ + I + + G G+ L ++V E E +A
Sbjct: 419 RWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELEAM 478
Query: 78 YFGIEWAKQHNINRVILEGDSMNVSNFLNGRQNSIHWTAKHVLKKVKSIASSLDQVSFLF 137
+ + + N VI E DS + LN + I + K ++ ++ + S +V F+F
Sbjct: 479 RWAVLSLSRFQYNYVIFESDSQVLIEILNN--DEIWPSLKPTIQDLQRLLSQFTEVKFVF 536
Query: 138 VNRQFNSLAHNLAVNS 153
+ R+ N+LA +A S
Sbjct: 537 IPREGNTLAERVARES 552