BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000112.1_g0220.1
(161 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G26280.3 | CTC-interacting domain 7 | Chr2:11188143-11190579 ... 243 2e-78
AT2G26280.1 | CTC-interacting domain 7 | Chr2:11188143-11190579 ... 243 2e-78
AT2G26280.5 | CTC-interacting domain 7 | Chr2:11188505-11190579 ... 103 3e-26
AT2G26280.2 | CTC-interacting domain 7 | Chr2:11188505-11190579 ... 103 3e-26
AT5G58720.1 | smr (Small MutS Related) domain-containing protein... 53 1e-08
>AT2G26280.3 | CTC-interacting domain 7 | Chr2:11188143-11190579
REVERSE LENGTH=567 | 201606
Length = 567
Score = 243 bits (621), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 117/161 (72%), Positives = 138/161 (85%)
Query: 1 MCTELREEAHDYARLGDAYFEQAGHPYLVGNKALAKDLSMKGQLHNMQMKAAHEKAQESI 60
M +ELREEA DYARL + YFEQA YLVGNKALAK+LS+KGQLHNMQMKAAH KAQE+I
Sbjct: 407 MYSELREEARDYARLRNVYFEQARQAYLVGNKALAKELSVKGQLHNMQMKAAHGKAQEAI 466
Query: 61 YNQRNSVALEQGRGQERIIDLHGLHLNEAIQRLRTEMNVLRSAARNFNQRLELYICVGTG 120
Y QRN V RG ER+IDLHGLH++EA+Q L+ E++VLRS AR +RL++YICVGTG
Sbjct: 467 YRQRNPVGQGNSRGNERMIDLHGLHVSEALQVLKHELSVLRSTARATQERLQIYICVGTG 526
Query: 121 HHTQGSRTPARLPVAVEQYLLQEEGLDYTEPQPGLLRVLIY 161
HHT+GSRTPARLPVAV++YLL+EEGLDY+EPQ GLLRV+IY
Sbjct: 527 HHTRGSRTPARLPVAVQRYLLEEEGLDYSEPQAGLLRVIIY 567
>AT2G26280.1 | CTC-interacting domain 7 | Chr2:11188143-11190579
REVERSE LENGTH=567 | 201606
Length = 567
Score = 243 bits (621), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 117/161 (72%), Positives = 138/161 (85%)
Query: 1 MCTELREEAHDYARLGDAYFEQAGHPYLVGNKALAKDLSMKGQLHNMQMKAAHEKAQESI 60
M +ELREEA DYARL + YFEQA YLVGNKALAK+LS+KGQLHNMQMKAAH KAQE+I
Sbjct: 407 MYSELREEARDYARLRNVYFEQARQAYLVGNKALAKELSVKGQLHNMQMKAAHGKAQEAI 466
Query: 61 YNQRNSVALEQGRGQERIIDLHGLHLNEAIQRLRTEMNVLRSAARNFNQRLELYICVGTG 120
Y QRN V RG ER+IDLHGLH++EA+Q L+ E++VLRS AR +RL++YICVGTG
Sbjct: 467 YRQRNPVGQGNSRGNERMIDLHGLHVSEALQVLKHELSVLRSTARATQERLQIYICVGTG 526
Query: 121 HHTQGSRTPARLPVAVEQYLLQEEGLDYTEPQPGLLRVLIY 161
HHT+GSRTPARLPVAV++YLL+EEGLDY+EPQ GLLRV+IY
Sbjct: 527 HHTRGSRTPARLPVAVQRYLLEEEGLDYSEPQAGLLRVIIY 567
>AT2G26280.5 | CTC-interacting domain 7 | Chr2:11188505-11190579
REVERSE LENGTH=494 | 201606
Length = 494
Score = 103 bits (257), Expect = 3e-26, Method: Composition-based stats.
Identities = 50/64 (78%), Positives = 55/64 (85%)
Query: 1 MCTELREEAHDYARLGDAYFEQAGHPYLVGNKALAKDLSMKGQLHNMQMKAAHEKAQESI 60
M +ELREEA DYARL + YFEQA YLVGNKALAK+LS+KGQLHNMQMKAAH KAQE+I
Sbjct: 407 MYSELREEARDYARLRNVYFEQARQAYLVGNKALAKELSVKGQLHNMQMKAAHGKAQEAI 466
Query: 61 YNQR 64
Y QR
Sbjct: 467 YRQR 470
>AT2G26280.2 | CTC-interacting domain 7 | Chr2:11188505-11190579
REVERSE LENGTH=494 | 201606
Length = 494
Score = 103 bits (257), Expect = 3e-26, Method: Composition-based stats.
Identities = 50/64 (78%), Positives = 55/64 (85%)
Query: 1 MCTELREEAHDYARLGDAYFEQAGHPYLVGNKALAKDLSMKGQLHNMQMKAAHEKAQESI 60
M +ELREEA DYARL + YFEQA YLVGNKALAK+LS+KGQLHNMQMKAAH KAQE+I
Sbjct: 407 MYSELREEARDYARLRNVYFEQARQAYLVGNKALAKELSVKGQLHNMQMKAAHGKAQEAI 466
Query: 61 YNQR 64
Y QR
Sbjct: 467 YRQR 470
>AT5G58720.1 | smr (Small MutS Related) domain-containing protein |
Chr5:23719976-23722974 REVERSE LENGTH=519 | 201606
Length = 519
Score = 53.1 bits (126), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 4 ELREEAHDYARLGDAYFEQAGHPYLVGNKALAKDLSMKGQLHNMQMKAAHEKAQESIYNQ 63
ELR+ A+D + +Y+++A Y G +A A LS KG++ + Q + A E+A + I+
Sbjct: 358 ELRKGANDQWNVTKSYYQKAAEAYSKGGRAHAAYLSDKGRVASKQAQRADERASQDIFVA 417
Query: 64 RNSVALEQGRGQERI--IDLHGLHLNEAIQRLRTEMNVLRSAARNFNQRLELYICVGTGH 121
RN +G E + IDLHG H+ A++ L+ + + S + L + G G
Sbjct: 418 RN-------KGIENVVTIDLHGQHVKPAMKLLKLHL-LFGSYVPSIQT---LRVITGCGA 466
Query: 122 HTQGSRTPARLPVAVEQYLLQEEGLDYTEPQPGLLRV 158
G + V LL+ EG+ Y E G L +
Sbjct: 467 SGFGKSKVKQSVVK----LLEREGVRYCEENRGTLLI 499