BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000112.1_g0230.1
(246 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G35590.1 | proteasome alpha subunit A1 | Chr5:13765417-137677... 462 e-167
AT2G05840.1 | 20S proteasome subunit PAA2 | Chr2:2234226-2236053... 454 e-164
AT2G05840.2 | 20S proteasome subunit PAA2 | Chr2:2234226-2235973... 409 e-147
AT2G05840.3 | 20S proteasome subunit PAA2 | Chr2:2234226-2235533... 370 e-132
AT1G16470.2 | proteasome subunit PAB1 | Chr1:5623122-5625439 FOR... 151 4e-45
>AT5G35590.1 | proteasome alpha subunit A1 | Chr5:13765417-13767768
REVERSE LENGTH=246 | 201606
Length = 246
Score = 462 bits (1189), Expect = e-167, Method: Compositional matrix adjust.
Identities = 214/246 (86%), Positives = 236/246 (95%)
Query: 1 MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKGSGITSIGVRGKDSVCVVTQKKVPDKL 60
MSRG+GAGYDRHITIFSPEGRL+QVEYAFKAVK +GITSIGVRGKDSVCVVTQKKVPDKL
Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 LDHTSVTHLFPITKFLGLLATGMTADARSLVQQARNQAAEFRFKWGYEMPVDVLAKWLAD 120
LD +SVTHLFPITK++GL+ATG+TADARSLVQQARNQAAEFRF +GYEMPVD+LAKW+AD
Sbjct: 61 LDQSSVTHLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIAD 120
Query: 121 KSQVYTQHAYMRPLGVAAMVLGIDEENGPQLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
KSQVYTQHAYMRPLGV AMV+G+DEENGP L+KCDPAGHF+GHKATSAG+KEQEA+NFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLE 180
Query: 181 KKMKNDPQFSYAETVQTAISALQSVLQEDFKATEIEVGVVRKESPEFRVLTTEEIDEHLT 240
KKMK +P F++ ETVQTAISALQSVLQEDFKATEIEVGVVR E+PEFR LTTEEI+EHLT
Sbjct: 181 KKMKENPSFTFDETVQTAISALQSVLQEDFKATEIEVGVVRAENPEFRALTTEEIEEHLT 240
Query: 241 AISERD 246
AISERD
Sbjct: 241 AISERD 246
>AT2G05840.1 | 20S proteasome subunit PAA2 | Chr2:2234226-2236053
FORWARD LENGTH=246 | 201606
Length = 246
Score = 454 bits (1169), Expect = e-164, Method: Compositional matrix adjust.
Identities = 212/246 (86%), Positives = 232/246 (94%)
Query: 1 MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKGSGITSIGVRGKDSVCVVTQKKVPDKL 60
MSRG+GAGYDRHITIFSPEGRL+QVEYAFKAVK +GITSIGVRGKDSVCVVTQKKVPDKL
Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 LDHTSVTHLFPITKFLGLLATGMTADARSLVQQARNQAAEFRFKWGYEMPVDVLAKWLAD 120
LD +SV+HLFP+TK+LGLLATGMTAD+RSLVQQARN+AAEFRF++GYEMP D+LAKW+AD
Sbjct: 61 LDQSSVSHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIAD 120
Query: 121 KSQVYTQHAYMRPLGVAAMVLGIDEENGPQLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
KSQVYTQHAYMRPLGV AMVLGIDEE GP L+KCDPAGHF+GHKATSAG+KEQEA+NFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLE 180
Query: 181 KKMKNDPQFSYAETVQTAISALQSVLQEDFKATEIEVGVVRKESPEFRVLTTEEIDEHLT 240
KKMK +P F+Y ETVQTAISALQSVLQEDFKATEIEVGVVR + P FR L TEEIDEHLT
Sbjct: 181 KKMKENPAFTYDETVQTAISALQSVLQEDFKATEIEVGVVRADDPLFRSLRTEEIDEHLT 240
Query: 241 AISERD 246
AISERD
Sbjct: 241 AISERD 246
>AT2G05840.2 | 20S proteasome subunit PAA2 | Chr2:2234226-2235973
FORWARD LENGTH=220 | 201606
Length = 220
Score = 409 bits (1051), Expect = e-147, Method: Compositional matrix adjust.
Identities = 189/217 (87%), Positives = 208/217 (95%)
Query: 1 MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKGSGITSIGVRGKDSVCVVTQKKVPDKL 60
MSRG+GAGYDRHITIFSPEGRL+QVEYAFKAVK +GITSIGVRGKDSVCVVTQKKVPDKL
Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 LDHTSVTHLFPITKFLGLLATGMTADARSLVQQARNQAAEFRFKWGYEMPVDVLAKWLAD 120
LD +SV+HLFP+TK+LGLLATGMTAD+RSLVQQARN+AAEFRF++GYEMP D+LAKW+AD
Sbjct: 61 LDQSSVSHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIAD 120
Query: 121 KSQVYTQHAYMRPLGVAAMVLGIDEENGPQLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
KSQVYTQHAYMRPLGV AMVLGIDEE GP L+KCDPAGHF+GHKATSAG+KEQEA+NFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLE 180
Query: 181 KKMKNDPQFSYAETVQTAISALQSVLQEDFKATEIEV 217
KKMK +P F+Y ETVQTAISALQSVLQEDFKATEIEV
Sbjct: 181 KKMKENPAFTYDETVQTAISALQSVLQEDFKATEIEV 217
>AT2G05840.3 | 20S proteasome subunit PAA2 | Chr2:2234226-2235533
FORWARD LENGTH=205 | 201606
Length = 205
Score = 370 bits (950), Expect = e-132, Method: Compositional matrix adjust.
Identities = 168/199 (84%), Positives = 188/199 (94%)
Query: 1 MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKGSGITSIGVRGKDSVCVVTQKKVPDKL 60
MSRG+GAGYDRHITIFSPEGRL+QVEYAFKAVK +GITSIGVRGKDSVCVVTQKKVPDKL
Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 LDHTSVTHLFPITKFLGLLATGMTADARSLVQQARNQAAEFRFKWGYEMPVDVLAKWLAD 120
LD +SV+HLFP+TK+LGLLATGMTAD+RSLVQQARN+AAEFRF++GYEMP D+LAKW+AD
Sbjct: 61 LDQSSVSHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIAD 120
Query: 121 KSQVYTQHAYMRPLGVAAMVLGIDEENGPQLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
KSQVYTQHAYMRPLGV AMVLGIDEE GP L+KCDPAGHF+GHKATSAG+KEQEA+NFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLE 180
Query: 181 KKMKNDPQFSYAETVQTAI 199
KKMK +P F+Y ETVQ +
Sbjct: 181 KKMKENPAFTYDETVQVIM 199
>AT1G16470.2 | proteasome subunit PAB1 | Chr1:5623122-5625439
FORWARD LENGTH=235 | 201606
Length = 235
Score = 151 bits (382), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 137/234 (58%), Gaps = 5/234 (2%)
Query: 9 YDRHITIFSPEGRLYQVEYAFKAVKGSGITSIGVRGKDSVCVVTQKKVPDKLLDHTSVTH 68
Y +T FSP G+L Q+E+A AV GSG TS+G++ + V + T+KK+P L+D SV
Sbjct: 6 YSFSLTTFSPSGKLVQIEHALTAV-GSGQTSLGIKASNGVVIATEKKLPSILVDEASVQK 64
Query: 69 LFPITKFLGLLATGMTADARSLVQQARNQAAEFRFKWGYEMPVDVLAKWLADKSQVYTQH 128
+ +T +G++ +GM D R LV+++R QA ++ + +PV L + A Q +TQ
Sbjct: 65 IQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQS 124
Query: 129 AYMRPLGVAAMVLGIDEENGPQLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPQ 188
+RP GV+ +V G D++ GPQL++ DP+G +F KA++ G A FLEK+ D +
Sbjct: 125 GGVRPFGVSLLVAGYDDK-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDME 183
Query: 189 FSYAETVQTAISALQSVLQEDFKATEIEVGVVRKESPEFRVLTTEEIDEHLTAI 242
+ + TAI L+ + + + IE+G + + FRVLT EID++L +
Sbjct: 184 LD--DAIHTAILTLKEGFEGEISSKNIEIGKIGADKV-FRVLTPAEIDDYLAEV 234