BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000112.1_g0330.1
(422 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 384 e-124
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 384 e-124
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 155 2e-44
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 88 3e-20
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 85 6e-20
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 384 bits (985), Expect = e-124, Method: Compositional matrix adjust.
Identities = 181/362 (50%), Positives = 250/362 (69%), Gaps = 5/362 (1%)
Query: 3 AKEIPEWRDAMAKEISALEQNNMWDLTPLPPGKKPIVCKWIYKIKYRSDGSIERHKARLA 62
AKE W AM EI A+E + W++ LPP KKPI CKW+YKIKY SDG+IER+KARL
Sbjct: 92 AKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLV 151
Query: 63 AKGYTQVEGIHYHDTFALVAKLVTVRVLLSLAAIRGWPLHQLDVNNAFLQGDLNEEVYMN 122
AKGYTQ EGI + +TF+ V KL +V+++L+++AI + LHQLD++NAFL GDL+EE+YM
Sbjct: 152 AKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMK 211
Query: 123 IPPGFG-KPGN----NQVCRLNKSLYGLKQASRKWFAKFSTGLKAEGFNQSSSDHSLFCY 177
+PPG+ + G+ N VC L KS+YGLKQASR+WF KFS L GF QS SDH+ F
Sbjct: 212 LPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLK 271
Query: 178 FHGSTVIYILVYVDDIILTGNNDKAIQSLRQRLEQRFSLKNLGRLQYFLVIEVSRSPKGI 237
+ + +LVYVDDII+ NND A+ L+ +L+ F L++LG L+YFL +E++RS GI
Sbjct: 272 ITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGI 331
Query: 238 FLCQRKYTLDILRDSGLLGAKPVSFPIEQHLKLLPTDGTPLDDPTQFRRLIGRLLYVTVT 297
+CQRKY LD+L ++GLLG KP S P++ + G D +RRLIGRL+Y+ +T
Sbjct: 332 NICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQIT 391
Query: 298 RPDITFSVNYLSQFMQHPRTTHMDATTRVIRYLKGTLDHGILLSSSSSLTISGFTDSDWA 357
R DI+F+VN LSQF + PR H A +++ Y+KGT+ G+ SS + + + F+D+ +
Sbjct: 392 RLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQ 451
Query: 358 SC 359
SC
Sbjct: 452 SC 453
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 384 bits (985), Expect = e-124, Method: Compositional matrix adjust.
Identities = 181/362 (50%), Positives = 250/362 (69%), Gaps = 5/362 (1%)
Query: 3 AKEIPEWRDAMAKEISALEQNNMWDLTPLPPGKKPIVCKWIYKIKYRSDGSIERHKARLA 62
AKE W AM EI A+E + W++ LPP KKPI CKW+YKIKY SDG+IER+KARL
Sbjct: 92 AKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLV 151
Query: 63 AKGYTQVEGIHYHDTFALVAKLVTVRVLLSLAAIRGWPLHQLDVNNAFLQGDLNEEVYMN 122
AKGYTQ EGI + +TF+ V KL +V+++L+++AI + LHQLD++NAFL GDL+EE+YM
Sbjct: 152 AKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMK 211
Query: 123 IPPGFG-KPGN----NQVCRLNKSLYGLKQASRKWFAKFSTGLKAEGFNQSSSDHSLFCY 177
+PPG+ + G+ N VC L KS+YGLKQASR+WF KFS L GF QS SDH+ F
Sbjct: 212 LPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLK 271
Query: 178 FHGSTVIYILVYVDDIILTGNNDKAIQSLRQRLEQRFSLKNLGRLQYFLVIEVSRSPKGI 237
+ + +LVYVDDII+ NND A+ L+ +L+ F L++LG L+YFL +E++RS GI
Sbjct: 272 ITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGI 331
Query: 238 FLCQRKYTLDILRDSGLLGAKPVSFPIEQHLKLLPTDGTPLDDPTQFRRLIGRLLYVTVT 297
+CQRKY LD+L ++GLLG KP S P++ + G D +RRLIGRL+Y+ +T
Sbjct: 332 NICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQIT 391
Query: 298 RPDITFSVNYLSQFMQHPRTTHMDATTRVIRYLKGTLDHGILLSSSSSLTISGFTDSDWA 357
R DI+F+VN LSQF + PR H A +++ Y+KGT+ G+ SS + + + F+D+ +
Sbjct: 392 RLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQ 451
Query: 358 SC 359
SC
Sbjct: 452 SC 453
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 155 bits (391), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 114/177 (64%), Gaps = 3/177 (1%)
Query: 184 IYILVYVDDIILTGNNDKAIQSLRQRLEQRFSLKNLGRLQYFLVIEVSRSPKGIFLCQRK 243
+Y+L+YVDDI+LTG+++ + L +L FS+K+LG + YFL I++ P G+FL Q K
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 244 YTLDILRDSGLLGAKPVSFPIEQHLKLLPTDGTP-LDDPTQFRRLIGRLLYVTVTRPDIT 302
Y IL ++G+L KP+S P+ LKL + T DP+ FR ++G L Y+T+TRPDI+
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDIS 118
Query: 303 FSVNYLSQFMQHPRTTHMDATTRVIRYLKGTLDHGILLSSSSSLTISGFTDSDWASC 359
++VN + Q M P D RV+RY+KGT+ HG+ + +S L + F DSDWA C
Sbjct: 119 YAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGC 175
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 87.8 bits (216), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 59/88 (67%)
Query: 7 PEWRDAMAKEISALEQNNMWDLTPLPPGKKPIVCKWIYKIKYRSDGSIERHKARLAAKGY 66
P W AM +E+ AL +N W L P P + + CKW++K K SDG+++R KARL AKG+
Sbjct: 38 PGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGF 97
Query: 67 TQVEGIHYHDTFALVAKLVTVRVLLSLA 94
Q EGI++ +T++ V + T+R +L++A
Sbjct: 98 HQEEGIYFVETYSPVVRTATIRTILNVA 125
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 85.1 bits (209), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 292 LYVTVTRPDITFSVNYLSQFMQHPRTTHMDATTRVIRYLKGTLDHGILLSSSSSLTISGF 351
+Y+T+TRPD+TF+VN LSQF RT M A +V+ Y+KGT+ G+ S++S L + F
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 352 TDSDWASCP 360
DSDWASCP
Sbjct: 61 ADSDWASCP 69