BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000112.1_g0350.1
(318 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G19140.1 | ubiquinone biosynthesis COQ9-like protein | Chr1:6... 338 e-116
AT1G19140.2 | ubiquinone biosynthesis COQ9-like protein | Chr1:6... 335 e-115
>AT1G19140.1 | ubiquinone biosynthesis COQ9-like protein |
Chr1:6611026-6612414 REVERSE LENGTH=311 | 201606
Length = 311
Score = 338 bits (868), Expect = e-116, Method: Compositional matrix adjust.
Identities = 175/316 (55%), Positives = 224/316 (70%), Gaps = 16/316 (5%)
Query: 1 MYRSVVKRLLLLQSHRNNINRRLIVPQTTITSRFLTDSIPLPVPPPKIIPSRENPQQQTL 60
MYR+ KRLL R L +P+ + S + S + I + E+P +
Sbjct: 1 MYRTAAKRLL--AGGGITTTRLLRLPK--LRSTIIPSSYTSGLCTSSIGGNTESPMGKQ- 55
Query: 61 ASETPNASEFETAQTAKEAVEEINRYERQSSREDHQQRRHRVEYQDEQARVLQAALPHVV 120
S PN S TA ++ E R H+ R+ R E+Q+EQARVL A+L HV
Sbjct: 56 -SVNPNQSG-PTASSSTGTGEGQRR---------HESRKPRAEFQEEQARVLSASLRHVP 104
Query: 121 RLGWSETAIVQGAKEVGVSPSIVGAFPRKEAALVEFFMDDCLQKLIDRIESGEDLKTLAH 180
RLGW+E A++ G+++VGVSPSIVG+F RKEAALVEFFMD+CLQ L+DRI+SG DL+ L
Sbjct: 105 RLGWTEEAMMAGSRDVGVSPSIVGSFSRKEAALVEFFMDECLQLLMDRIDSGLDLQNLIP 164
Query: 181 SDRIAKLIQIRLEMQAPYVSKWAQALSIQAQPVNIPTSFKQRAVLIDEILHASGDQASDI 240
S+RI+KLI+IRLEMQ PY+SKW QALSIQA P+N+PTSFKQRA+L+DEI HA GD ASD+
Sbjct: 165 SERISKLIRIRLEMQVPYMSKWPQALSIQAHPLNVPTSFKQRAMLVDEIWHAVGDGASDL 224
Query: 241 DWYLKRTVLGGIYSAVEVYMLTDNSPDFRDTWAFLKNRVKDAFDLGKTVQEAKYLAEAVG 300
DWY+KRT+LGG+YS E+YMLTD+S + RDTWAFL +RVKDAFDL K++QEAKY AE +G
Sbjct: 225 DWYVKRTILGGVYSTTEIYMLTDDSLEHRDTWAFLDDRVKDAFDLKKSIQEAKYFAEDIG 284
Query: 301 AGIGSSLQGFMKGMSQ 316
AG+G S+QG M G+ Q
Sbjct: 285 AGVGKSVQGLMNGVMQ 300
>AT1G19140.2 | ubiquinone biosynthesis COQ9-like protein |
Chr1:6611026-6612414 REVERSE LENGTH=312 | 201606
Length = 312
Score = 335 bits (858), Expect = e-115, Method: Compositional matrix adjust.
Identities = 175/317 (55%), Positives = 224/317 (70%), Gaps = 17/317 (5%)
Query: 1 MYRSVVKRLLLLQSHRNNINRRLIVPQTTITSRFLTDSIPLPVPPPKIIPSRENPQQQTL 60
MYR+ KRLL R L +P+ + S + S + I + E+P +
Sbjct: 1 MYRTAAKRLL--AGGGITTTRLLRLPK--LRSTIIPSSYTSGLCTSSIGGNTESPMGKQ- 55
Query: 61 ASETPNASEFETAQTAKEAVEEINRYERQSSREDHQQRRHRVEYQDEQARVLQAALPHVV 120
S PN S TA ++ E R H+ R+ R E+Q+EQARVL A+L HV
Sbjct: 56 -SVNPNQSG-PTASSSTGTGEGQRR---------HESRKPRAEFQEEQARVLSASLRHVP 104
Query: 121 RLGWSETAIVQGAKEVGVSPSIVGAFPRKEAALVEFFMDDCLQKLIDRIESGEDLKTLAH 180
RLGW+E A++ G+++VGVSPSIVG+F RKEAALVEFFMD+CLQ L+DRI+SG DL+ L
Sbjct: 105 RLGWTEEAMMAGSRDVGVSPSIVGSFSRKEAALVEFFMDECLQLLMDRIDSGLDLQNLIP 164
Query: 181 SDRIAKLIQIRLEMQAPYVSKWAQALSIQAQPVNIPTSFKQRAVLIDEILHASGDQASDI 240
S+RI+KLI+IRLEMQ PY+SKW QALSIQA P+N+PTSFKQRA+L+DEI HA GD ASD+
Sbjct: 165 SERISKLIRIRLEMQVPYMSKWPQALSIQAHPLNVPTSFKQRAMLVDEIWHAVGDGASDL 224
Query: 241 DWYLKRTVLGGIYSAVEVYMLTDNS-PDFRDTWAFLKNRVKDAFDLGKTVQEAKYLAEAV 299
DWY+KRT+LGG+YS E+YMLTD+S + RDTWAFL +RVKDAFDL K++QEAKY AE +
Sbjct: 225 DWYVKRTILGGVYSTTEIYMLTDDSLAEHRDTWAFLDDRVKDAFDLKKSIQEAKYFAEDI 284
Query: 300 GAGIGSSLQGFMKGMSQ 316
GAG+G S+QG M G+ Q
Sbjct: 285 GAGVGKSVQGLMNGVMQ 301