BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000112.1_g0400.1
(292 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G20700.1 | senescence-associated family protein%2C putative (... 123 2e-33
AT1G74940.1 | cyclin-dependent kinase%2C putative (DUF581) | Chr... 119 3e-32
AT1G19200.1 | cyclin-dependent kinase%2C putative (DUF581) | Chr... 90 4e-21
AT1G19200.2 | cyclin-dependent kinase%2C putative (DUF581) | Chr... 90 4e-21
AT1G22160.1 | senescence-associated family protein (DUF581) | Ch... 79 9e-18
>AT5G20700.1 | senescence-associated family protein%2C putative
(DUF581) | Chr5:7006178-7007003 REVERSE LENGTH=248 |
201606
Length = 248
Score = 123 bits (308), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 134/287 (46%), Gaps = 59/287 (20%)
Query: 1 MLGKATKARL--IGKMIKPENSGYRNIYSDEIITSPKSPLDFKI-------KSPRGMKIC 51
ML K T + I +++ N + D ++TSPKSPLDFKI S +
Sbjct: 1 MLTKRTHPMIGKISELLVGVNRSTAAPFFDVLMTSPKSPLDFKILPQISQRNSSKRFYDD 60
Query: 52 DMGG-VGLGILAALEKSSGGPAVGGCGGSGGGSEIPMKLIVGSLNLNMNLNRSSLPIPIG 110
++GG VGLGI+AALE S+ + I N S P+
Sbjct: 61 NLGGSVGLGIVAALENSN------------------TRRITSVCRSEPNQPGRSDPVQFM 102
Query: 111 SSSSCNKSRTSETKKCREIVHFEEEEEEESESYTYVTCHNGPNKKSVTRVYCDHGVVEDE 170
S E F +EE+ YT VTCH+GP+ TRVY G
Sbjct: 103 SHGGSTDGEDEEM--------FIMDEED----YTLVTCHHGPSGSCNTRVYDKDGF---- 146
Query: 171 NLYKNELFDHHSHQNYRLKNLSVFYESPPRFTESKLLFPTSDFLSSCYLCRKNLHGKDIY 230
+ +++ D RL + V ESP E+ F FL+SCYLCRK LHG+DI+
Sbjct: 147 ECFSSKINDDRRE---RLFVVDVVTESP----ENSPEFQGLGFLNSCYLCRKKLHGQDIF 199
Query: 231 MYRGEKAFCSTECRQNQIVKDERKEKCRREASIYGDQYASISPYSNG 277
+YRGEKAFCSTECR + I DERKE+CR + S SPY+ G
Sbjct: 200 IYRGEKAFCSTECRSSHIANDERKERCRSK--------FSTSPYTAG 238
>AT1G74940.1 | cyclin-dependent kinase%2C putative (DUF581) |
Chr1:28146284-28147065 FORWARD LENGTH=222 | 201606
Length = 222
Score = 119 bits (298), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 121/269 (44%), Gaps = 68/269 (25%)
Query: 9 RLIGKMIKPENSGYRNIYSDEIITSPKSPLDFKIKSPRGMKICDMGGVGLGILAALEKSS 68
R + +M+ P S I +E SP+SPLD SP K GGVGLGI+AALE++S
Sbjct: 12 RKLSEMLVP-RSRSAAIKPEEYTASPRSPLDLNFPSPVHSKRFGSGGVGLGIVAALEETS 70
Query: 69 GGPAVGGCGGSGGGSEIPMKLIVGSLNLNMNLNRSSLPIPIGSSSSCNKSRTSETKKCRE 128
G +NR + R S +C E
Sbjct: 71 NG-----------------------------INRH------------DPVRYSGRFRCPE 89
Query: 129 IVHFEEEEEEESESYTYVTCHNGPNKKSVTRVYCDHGVVEDENLYKNELFDHHSHQNYRL 188
I +EE YTYVT NGP K Y D G EN Y+ R+
Sbjct: 90 IDLSDEE-------YTYVTSPNGPTKV----YYNDDGFELSENDYR------------RV 126
Query: 189 KNLSVFYESPPRFTESKLLFPTSDFLSSCYLCRKNLHGKDIYMYRGEKAFCSTECRQNQI 248
V + PP + PT +FLSSC LC+K L GKDIYMY+GE FCS ECR QI
Sbjct: 127 HKPMVTVDEPPVIERQSVRGPT-EFLSSCCLCKKKLQGKDIYMYKGEMGFCSAECRSVQI 185
Query: 249 VKDERKEKCRREASIYGDQYASISPYSNG 277
+ DER+E+C+ + S D + SPY+ G
Sbjct: 186 MNDERQEQCKTQVSRNADVLS--SPYAAG 212
>AT1G19200.1 | cyclin-dependent kinase%2C putative (DUF581) |
Chr1:6625104-6625856 REVERSE LENGTH=215 | 201606
Length = 215
Score = 89.7 bits (221), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 110/240 (45%), Gaps = 62/240 (25%)
Query: 24 NIYSDEIITSPKSPLDF-KIKSPRGMKICDMGG-VGLGILAALEKSSGGPAVGGCGGSGG 81
I D S SPLD K SP K D GG +GLGI+AALEKSS G + +G
Sbjct: 9 TISPDYFTASQTSPLDMMKFPSPGSSKRYDNGGGIGLGIVAALEKSSIG--INPVCHTGA 66
Query: 82 GSEIPMKLIVGSLNLNMNLNRSSLPIPIGSSSSCNKSRTSETKKCREIVHFEEEEEEESE 141
GS+ +L R S + + +SE
Sbjct: 67 GSK------------GFDLARYSKRFQFAAGIDLS----------------------DSE 92
Query: 142 SYTYVTCHNGPNKKSVTRVYCDHGVVEDENLYKNELFDH-----HSHQNYRLKNLSVFYE 196
YT VT +G +T+VY YK E F+ + Q +R K + + E
Sbjct: 93 EYTCVTTRDG-----LTKVY-----------YKEEEFEFGHNLLNGDQRWR-KPIEIAEE 135
Query: 197 SPPRFTESKLLFPTSDFLSSCYLCRKNLHGKDIYMYRGEKAFCSTECRQNQIVKDERKEK 256
SP + E ++L DFL+SC LC+K L GKDIYMY+G++ FCS ECR +I++D KE+
Sbjct: 136 SPAK--ERRVLRDCPDFLTSCCLCKKKLQGKDIYMYKGDEGFCSKECRSLKIMEDSLKEQ 193
>AT1G19200.2 | cyclin-dependent kinase%2C putative (DUF581) |
Chr1:6625104-6625895 REVERSE LENGTH=228 | 201606
Length = 228
Score = 89.7 bits (221), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 110/240 (45%), Gaps = 62/240 (25%)
Query: 24 NIYSDEIITSPKSPLDF-KIKSPRGMKICDMGG-VGLGILAALEKSSGGPAVGGCGGSGG 81
I D S SPLD K SP K D GG +GLGI+AALEKSS G + +G
Sbjct: 22 TISPDYFTASQTSPLDMMKFPSPGSSKRYDNGGGIGLGIVAALEKSSIG--INPVCHTGA 79
Query: 82 GSEIPMKLIVGSLNLNMNLNRSSLPIPIGSSSSCNKSRTSETKKCREIVHFEEEEEEESE 141
GS+ +L R S + + +SE
Sbjct: 80 GSK------------GFDLARYSKRFQFAAGIDLS----------------------DSE 105
Query: 142 SYTYVTCHNGPNKKSVTRVYCDHGVVEDENLYKNELFDH-----HSHQNYRLKNLSVFYE 196
YT VT +G +T+VY YK E F+ + Q +R K + + E
Sbjct: 106 EYTCVTTRDG-----LTKVY-----------YKEEEFEFGHNLLNGDQRWR-KPIEIAEE 148
Query: 197 SPPRFTESKLLFPTSDFLSSCYLCRKNLHGKDIYMYRGEKAFCSTECRQNQIVKDERKEK 256
SP + E ++L DFL+SC LC+K L GKDIYMY+G++ FCS ECR +I++D KE+
Sbjct: 149 SPAK--ERRVLRDCPDFLTSCCLCKKKLQGKDIYMYKGDEGFCSKECRSLKIMEDSLKEQ 206
>AT1G22160.1 | senescence-associated family protein (DUF581) |
Chr1:7823238-7823774 FORWARD LENGTH=147 | 201606
Length = 147
Score = 78.6 bits (192), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 178 FDHHSHQNYRLKNLSVFYESPPRFTESKLLFPTS-DFLSSCYLCRKNL-HGKDIYMYRGE 235
D H + RL + + PR T+ + S DFL SC LC++ L HG+DIYMYRG+
Sbjct: 42 VDEHRQVHQRLLDQRLLAMVSPRGTQRRHSSDYSEDFLRSCSLCKRLLVHGRDIYMYRGD 101
Query: 236 KAFCSTECRQNQIVKDERKEK 256
+AFCS ECRQ QI DERKEK
Sbjct: 102 RAFCSLECRQQQITVDERKEK 122