BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000112.1_g0440.1
(200 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 69 2e-13
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 69 2e-13
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 62 8e-12
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 61 2e-11
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 68.6 bits (166), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 36/60 (60%)
Query: 9 WLGAMKSEKESMSENQVWNLVDLPDGVTPIGCKWVFKMKTDRDGNVSVFKARLVAKGCKQ 68
W GAM E +M W + LP PIGCKWV+K+K + DG + +KARLVAKG Q
Sbjct: 98 WCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQ 157
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 71 DDILLIGNNIPMFESVKDRLRKCFSMKDLRDAEYILGIKIYRDKSKKMIRLSQETYIDKI 130
DDI++ NN + +K +L+ CF ++DL +Y LG++I R S I + Q Y +
Sbjct: 285 DDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIAR--SAAGINICQRKYALDL 342
Query: 131 LCRFKMKDSRRGFLPMTQDTVLSTNQSPKDPDEQAHMNKVSYASAIGFIMYVMICTRPDV 190
L + + +PM S + D +A Y IG +MY+ I TR D+
Sbjct: 343 LDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKA------YRRLIGRLMYLQI-TRLDI 395
Query: 191 SYALSMCSRY 200
S+A++ S++
Sbjct: 396 SFAVNKLSQF 405
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 68.6 bits (166), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 36/60 (60%)
Query: 9 WLGAMKSEKESMSENQVWNLVDLPDGVTPIGCKWVFKMKTDRDGNVSVFKARLVAKGCKQ 68
W GAM E +M W + LP PIGCKWV+K+K + DG + +KARLVAKG Q
Sbjct: 98 WCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQ 157
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 71 DDILLIGNNIPMFESVKDRLRKCFSMKDLRDAEYILGIKIYRDKSKKMIRLSQETYIDKI 130
DDI++ NN + +K +L+ CF ++DL +Y LG++I R S I + Q Y +
Sbjct: 285 DDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIAR--SAAGINICQRKYALDL 342
Query: 131 LCRFKMKDSRRGFLPMTQDTVLSTNQSPKDPDEQAHMNKVSYASAIGFIMYVMICTRPDV 190
L + + +PM S + D +A Y IG +MY+ I TR D+
Sbjct: 343 LDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKA------YRRLIGRLMYLQI-TRLDI 395
Query: 191 SYALSMCSRY 200
S+A++ S++
Sbjct: 396 SFAVNKLSQF 405
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 61.6 bits (148), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 9 WLGAMKSEKESMSENQVWNLVDLPDGVTPIGCKWVFKMKTDRDGNVSVFKARLVAKGCKQ 68
W AM+ E +++S N+ W LV P +GCKWVFK K DG + KARLVAKG Q
Sbjct: 40 WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQ 99
Query: 69 IHDDILLIGNNIPMFESVKDR 89
+ I + P+ + R
Sbjct: 100 -EEGIYFVETYSPVVRTATIR 119
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 61.2 bits (147), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 15/132 (11%)
Query: 71 DDILLIGNNIPMFESVKDRLRKCFSMKDLRDAEYILGIKIYRDKSKKMIRLSQETYIDKI 130
DDILL G++ + + +L FSMKDL Y LGI+I S + LSQ Y ++I
Sbjct: 8 DDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQTKYAEQI 65
Query: 131 LCRFKMKDSR--RGFLPMTQDTVLSTNQSPKDPDEQAHMNKVSYASAIGFIMYVMICTRP 188
L M D + LP+ ++ +ST + P DP + + S +G + Y+ + TRP
Sbjct: 66 LNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSD--------FRSIVGALQYLTL-TRP 115
Query: 189 DVSYALSM-CSR 199
D+SYA+++ C R
Sbjct: 116 DISYAVNIVCQR 127