BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000112.1_g0460.1
(85 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 98 2e-25
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 98 2e-25
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 47 2e-07
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 98.2 bits (243), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 58/80 (72%)
Query: 1 MLGSSPLSWKSKKQPTVAKSSAEAEYRSLANLTCELQWIKSLLHDLGINHSSPMSVYCDN 60
LG+S +SWKSKKQ V+KSSAEAEYR+L+ T E+ W+ +L + S P ++CDN
Sbjct: 466 FLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDN 525
Query: 61 RAALHIADNPVFHERTKHIE 80
AA+HIA N VFHERTKHIE
Sbjct: 526 TAAIHIATNAVFHERTKHIE 545
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 98.2 bits (243), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 58/80 (72%)
Query: 1 MLGSSPLSWKSKKQPTVAKSSAEAEYRSLANLTCELQWIKSLLHDLGINHSSPMSVYCDN 60
LG+S +SWKSKKQ V+KSSAEAEYR+L+ T E+ W+ +L + S P ++CDN
Sbjct: 466 FLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDN 525
Query: 61 RAALHIADNPVFHERTKHIE 80
AA+HIA N VFHERTKHIE
Sbjct: 526 TAAIHIATNAVFHERTKHIE 545
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 47.0 bits (110), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 1 MLGSSPLSWKSKKQPTVAKSSAEAEYRSLANLTCELQW 38
LG + +SW +K+QPTV++SS E EYR+LA EL W
Sbjct: 188 FLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225