BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000113.1_g0020.1
(141 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G28085.1 | SAUR-like auxin-responsive protein family | Chr2:1... 117 2e-34
AT1G19830.1 | SAUR-like auxin-responsive protein family | Chr1:6... 82 1e-20
AT2G21220.1 | SAUR-like auxin-responsive protein family | Chr2:9... 77 4e-19
AT3G09870.1 | SAUR-like auxin-responsive protein family | Chr3:3... 76 1e-18
AT4G34760.1 | SAUR-like auxin-responsive protein family | Chr4:1... 75 2e-18
>AT2G28085.1 | SAUR-like auxin-responsive protein family |
Chr2:11968182-11968556 REVERSE LENGTH=124 | 201606
Length = 124
Score = 117 bits (292), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 76/110 (69%), Gaps = 3/110 (2%)
Query: 13 KKINGIVKLKVVAEKLLQ-RSLSLTKKHDFEDNYSDSVPEDVKVGHFAVMAIDNGN--PK 69
KK+ GIVKLK V E+L+Q + S KK E+ D VP+DVK GHFAV+A+D + +
Sbjct: 14 KKMGGIVKLKNVVERLVQIKGFSSAKKPCPEEYGRDCVPKDVKEGHFAVIAVDGYHEPTQ 73
Query: 70 RFIVSLSFLTHPAFRKLLEQAEEEFGFDHNGALKVPCRSIELERILFGQW 119
RF+V L FL HP FRKLLEQAEEE+GF H+GAL VPCR L IL QW
Sbjct: 74 RFVVPLMFLEHPMFRKLLEQAEEEYGFYHDGALMVPCRPSHLRMILTEQW 123
>AT1G19830.1 | SAUR-like auxin-responsive protein family |
Chr1:6852230-6852583 FORWARD LENGTH=117 | 201606
Length = 117
Score = 81.6 bits (200), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 60/98 (61%), Gaps = 7/98 (7%)
Query: 23 VVAEKLLQRSLSLTKKHDFEDNYS-----DSVPEDVKVGHFAVMAIDNGNPKRFIVSLSF 77
+ +++L+R SL KK E N + DS+P DV GHF V GN R+++ +SF
Sbjct: 13 TMIKQILKRCSSLGKKQSSEYNDTHEHDGDSLPLDVPKGHFVVYV--GGNRVRYVLPISF 70
Query: 78 LTHPAFRKLLEQAEEEFGFDHNGALKVPCRSIELERIL 115
LT P F+ LL+QAEEEFGFDHN L +PC + + ++
Sbjct: 71 LTRPEFQLLLQQAEEEFGFDHNMGLTIPCEEVAFKSLI 108
>AT2G21220.1 | SAUR-like auxin-responsive protein family |
Chr2:9089380-9089694 FORWARD LENGTH=104 | 201606
Length = 104
Score = 77.0 bits (188), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 5/84 (5%)
Query: 26 EKLLQRSLSLTKKHDFEDNYSDSVPEDVKVGHFAVMAIDNGNPKRFIVSLSFLTHPAFRK 85
+++L+R SL K +++ D +P DV GHF V + + R+IV +SFLTHP F+
Sbjct: 16 KQILKRCSSLAKNQCYDE---DGLPVDVPKGHFPVYVGEKRS--RYIVPISFLTHPKFKS 70
Query: 86 LLEQAEEEFGFDHNGALKVPCRSI 109
LL+QAEEEFGF+H+ L +PC +
Sbjct: 71 LLQQAEEEFGFNHDMGLTIPCEEV 94
>AT3G09870.1 | SAUR-like auxin-responsive protein family |
Chr3:3027555-3027896 REVERSE LENGTH=113 | 201606
Length = 113
Score = 75.9 bits (185), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%)
Query: 42 EDNYSDSVPEDVKVGHFAVMAIDNGNPKRFIVSLSFLTHPAFRKLLEQAEEEFGFDHNGA 101
E N + +P DVK GH AV+A+ KRF++ L L P F +LLEQA EEFGF G
Sbjct: 34 EGNAASMIPSDVKEGHVAVIAVKGERIKRFVLELEELNKPEFLRLLEQAREEFGFQPRGP 93
Query: 102 LKVPCRSIELERILFGQWD 120
L +PC+ E+++IL G +
Sbjct: 94 LTIPCQPEEVQKILQGSRE 112
>AT4G34760.1 | SAUR-like auxin-responsive protein family |
Chr4:16582471-16582794 REVERSE LENGTH=107 | 201606
Length = 107
Score = 75.5 bits (184), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 59/92 (64%), Gaps = 5/92 (5%)
Query: 24 VAEKLLQRSLSLTKKHDFEDNYS-DSVPEDVKVGHFAVMAIDNGNPKRFIVSLSFLTHPA 82
+ +++L+R SL KK+ Y D +P DV GHF V +N + R+IV +SFLTHP
Sbjct: 15 MLKQILKRCSSLGKKNG--GGYDEDCLPLDVPKGHFPVYVGENRS--RYIVPISFLTHPE 70
Query: 83 FRKLLEQAEEEFGFDHNGALKVPCRSIELERI 114
F+ LL++AEEEFGFDH+ L +PC + + +
Sbjct: 71 FQSLLQRAEEEFGFDHDMGLTIPCDELVFQTL 102