BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000113.1_g0100.1
(494 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G28780.1 | PIF1 helicase | Chr5:10812907-10814173 REVERSE LEN... 112 4e-27
AT3G51690.1 | PIF1 helicase | Chr3:19176731-19178107 REVERSE LEN... 102 7e-24
AT3G51700.1 | PIF1 helicase | Chr3:19179443-19181145 REVERSE LEN... 95 4e-21
>AT5G28780.1 | PIF1 helicase | Chr5:10812907-10814173 REVERSE
LENGTH=337 | 201606
Length = 337
Score = 112 bits (280), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 92/167 (55%), Gaps = 1/167 (0%)
Query: 328 LEELINEIYLELNLVQNLTIDYLTEQIILSARNEDVSSINISALSLTPGEMITYLAADKL 387
L+++ Y++ ++ Q YLTE+ IL+ NE V IN LS G+ YL++ +
Sbjct: 94 LQQVTKGAYVQFSVSQ-PNFQYLTERGILTPHNEYVDEINAYMLSQVGGDSKEYLSSYSI 152
Query: 388 DETEDNNYSFNVSYSTDLLNSLNPSGLPPFKLQIKVGCPIMLLKNPSPKDGLCNGTRLMV 447
+ + + Y LNSL LP K+ +K G PIM ++N + K+GLCNGTRL+V
Sbjct: 153 GKADTIGADYEALYHVKYLNSLEFPSLPKHKISLKKGVPIMQMRNFNQKEGLCNGTRLIV 212
Query: 448 VNCAMRIFEAKILTGDKRGNTVFIPRISLSPSSSELNIHFTRRQFPV 494
N ++ EA+I+TG G V IPR LSP SE R+QFP+
Sbjct: 213 TNLGEQVIEAQIVTGTHAGKMVSIPRFILSPPQSEHPFTLRRQQFPM 259
>AT3G51690.1 | PIF1 helicase | Chr3:19176731-19178107 REVERSE
LENGTH=331 | 201606
Length = 331
Score = 102 bits (255), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 5/167 (2%)
Query: 328 LEELINEIYLELNLVQNLTIDYLTEQIILSARNEDVSSINISALSLTPGEMITYLAADKL 387
++ L+ E+Y E ++ D+ + IL R++DV IN LSL PGE L+ D +
Sbjct: 96 IKTLLKEVYGEY-FAKSYNPDFCHDSAILCHRDDDVDQINDYMLSLLPGEEKECLSTDSI 154
Query: 388 DETEDNNYSFNVSYSTDLLNSLNPSGLPPFKLQIKVGCPIMLLKNPSPKDGLCNGTRLMV 447
+ +++ + ++LNS+ GLP FKL++KVG P+MLL++ P G GTRL +
Sbjct: 155 SPSPNDD----MFVPLEVLNSIKVPGLPDFKLRLKVGAPVMLLRDLDPSRGFFTGTRLQI 210
Query: 448 VNCAMRIFEAKILTGDKRGNTVFIPRISLSPSSSELNIHFTRRQFPV 494
+ EA I+ G+K G ++IPRI+ P+ + + R Q+P+
Sbjct: 211 TRLCGFLLEAMIIAGNKHGKKIWIPRIASYPTETNFPLQMRRTQYPL 257
>AT3G51700.1 | PIF1 helicase | Chr3:19179443-19181145 REVERSE
LENGTH=344 | 201606
Length = 344
Score = 95.1 bits (235), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 328 LEELINEIYLELNLVQNLTIDYLTEQIILSARNEDVSSINISALSLTPGEMITYLAADKL 387
++ +++E+Y E + ++ D+ E+ IL N+ IN LS GE AD +
Sbjct: 97 IKTIVDEVYGE-SFTESYNPDFYQERAILCHTNDVADEINDYMLSQLQGEETKCYGADTI 155
Query: 388 DETEDNNYSFNVSYSTDLLNSLNPSGLPPFKLQIKVGCPIMLLKNPSPKDGLCNGTRLMV 447
T + + Y + LNS+ G P FKL++KVG P+MLL++ +P L GTRL +
Sbjct: 156 YPTHASPND-KMLYPLEFLNSIKIPGFPDFKLRLKVGAPVMLLRDLAPYGWLRKGTRLQI 214
Query: 448 VNCAMRIFEAKILTGDKRGNTVFIPRISLSPSSSELNIHFTRRQFPV 494
+ EA I+TG+ G V IPRI ++ I RRQFPV
Sbjct: 215 TRVETFVLEAMIITGNNHGEKVLIPRIPSDLREAKFPIKMRRRQFPV 261