BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000113.1_g0160.1
(568 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 419 e-135
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 419 e-135
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 224 3e-69
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 117 2e-30
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 86 9e-20
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 419 bits (1078), Expect = e-135, Method: Compositional matrix adjust.
Identities = 203/469 (43%), Positives = 299/469 (63%), Gaps = 4/469 (0%)
Query: 39 EPTNYKVAIQNIHWKISMEKEFQALMKNKTWTLTPRLPHMNVLGCKWVFKVKHNSDGTLQ 98
EP+ Y A + + W +M+ E A+ TW + P+ +GCKWV+K+K+NSDGT++
Sbjct: 85 EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE 144
Query: 99 RYKARLVAQGFNQQEGVDYLETFSPVVKIQTVRVVLTLAVTKKWHIHQLDVSNAFLHGEL 158
RYKARLVA+G+ QQEG+D++ETFSPV K+ +V+++L ++ + +HQLD+SNAFL+G+L
Sbjct: 145 RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDL 204
Query: 159 NETVYMKQPPGFV----DDHCPDYVCHLSKALYGLKQAPRAWFYRMTQFFQQWGFQKSTS 214
+E +YMK PPG+ D P+ VC+L K++YGLKQA R WF + + +GF +S S
Sbjct: 205 DEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHS 264
Query: 215 DTSMFIYHYDRDWMIFLLYVDDIILTGSHISLLNQLFNNLTQEFAMKKLGDLHYFLGIEV 274
D + F+ ++ L+YVDDII+ ++ + +++L + L F ++ LG L YFLG+E+
Sbjct: 265 DHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEI 324
Query: 275 QRSSSSLLLTQTKYIYELLEKAGLSDSKPSITPVSVGKRLSKFDGDPIDNSFFYRSTVGG 334
RS++ + + Q KY +LL++ GL KPS P+ S G ++ YR +G
Sbjct: 325 ARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGR 384
Query: 335 LQYVTLTRPDLTFSVNYLSQFMHQPRSRHLILLKKALRYLKGTIGAGITITPGDCALLSG 394
L Y+ +TR D++F+VN LSQF PR H + K L Y+KGT+G G+ + L
Sbjct: 385 LMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQV 444
Query: 395 FSDSDWGGCPDTRRSTNDYCVFLGSTLVSWSSKKQATVSRSSTTAEYRALSLAASELLWF 454
FSD+ + C DTRRSTN YC+FLG++L+SW SKKQ VS+SS AEYRALS A E++W
Sbjct: 445 FSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWL 504
Query: 455 TYLLAELGISAKLPMVLSCDNMGVKYLASNPVFHARTKHIEIDFHFIRD 503
EL + P +L CDN ++A+N VFH RTKHIE D H +R+
Sbjct: 505 AQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 419 bits (1078), Expect = e-135, Method: Compositional matrix adjust.
Identities = 203/469 (43%), Positives = 299/469 (63%), Gaps = 4/469 (0%)
Query: 39 EPTNYKVAIQNIHWKISMEKEFQALMKNKTWTLTPRLPHMNVLGCKWVFKVKHNSDGTLQ 98
EP+ Y A + + W +M+ E A+ TW + P+ +GCKWV+K+K+NSDGT++
Sbjct: 85 EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE 144
Query: 99 RYKARLVAQGFNQQEGVDYLETFSPVVKIQTVRVVLTLAVTKKWHIHQLDVSNAFLHGEL 158
RYKARLVA+G+ QQEG+D++ETFSPV K+ +V+++L ++ + +HQLD+SNAFL+G+L
Sbjct: 145 RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDL 204
Query: 159 NETVYMKQPPGFV----DDHCPDYVCHLSKALYGLKQAPRAWFYRMTQFFQQWGFQKSTS 214
+E +YMK PPG+ D P+ VC+L K++YGLKQA R WF + + +GF +S S
Sbjct: 205 DEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHS 264
Query: 215 DTSMFIYHYDRDWMIFLLYVDDIILTGSHISLLNQLFNNLTQEFAMKKLGDLHYFLGIEV 274
D + F+ ++ L+YVDDII+ ++ + +++L + L F ++ LG L YFLG+E+
Sbjct: 265 DHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEI 324
Query: 275 QRSSSSLLLTQTKYIYELLEKAGLSDSKPSITPVSVGKRLSKFDGDPIDNSFFYRSTVGG 334
RS++ + + Q KY +LL++ GL KPS P+ S G ++ YR +G
Sbjct: 325 ARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGR 384
Query: 335 LQYVTLTRPDLTFSVNYLSQFMHQPRSRHLILLKKALRYLKGTIGAGITITPGDCALLSG 394
L Y+ +TR D++F+VN LSQF PR H + K L Y+KGT+G G+ + L
Sbjct: 385 LMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQV 444
Query: 395 FSDSDWGGCPDTRRSTNDYCVFLGSTLVSWSSKKQATVSRSSTTAEYRALSLAASELLWF 454
FSD+ + C DTRRSTN YC+FLG++L+SW SKKQ VS+SS AEYRALS A E++W
Sbjct: 445 FSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWL 504
Query: 455 TYLLAELGISAKLPMVLSCDNMGVKYLASNPVFHARTKHIEIDFHFIRD 503
EL + P +L CDN ++A+N VFH RTKHIE D H +R+
Sbjct: 505 AQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 224 bits (570), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 116/229 (50%), Positives = 149/229 (65%), Gaps = 7/229 (3%)
Query: 228 MIFLLYVDDIILTGSHISLLNQLFNNLTQEFAMKKLGDLHYFLGIEVQRSSSSLLLTQTK 287
M LLYVDDI+LTGS +LLN L L+ F+MK LG +HYFLGI+++ S L L+QTK
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 288 YIYELLEKAGLSDSKPSITPVSVGKRLSKFDG---DPIDNSFFYRSTVGGLQYVTLTRPD 344
Y ++L AG+ D KP TP+ + S DP D +RS VG LQY+TLTRPD
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSD----FRSIVGALQYLTLTRPD 116
Query: 345 LTFSVNYLSQFMHQPRSRHLILLKKALRYLKGTIGAGITITPGDCALLSGFSDSDWGGCP 404
++++VN + Q MH+P LLK+ LRY+KGTI G+ I + F DSDW GC
Sbjct: 117 ISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCT 176
Query: 405 DTRRSTNDYCVFLGSTLVSWSSKKQATVSRSSTTAEYRALSLAASELLW 453
TRRST +C FLG ++SWS+K+Q TVSRSST EYRAL+L A+EL W
Sbjct: 177 STRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 117 bits (292), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 92/139 (66%), Gaps = 16/139 (11%)
Query: 1 MQTRLKSGI--LKPESIPDHVAHYSVPHALSVNTSVHQIVEPTNYKVAIQNIHWKISMEK 58
M TR K+GI L P+ ++L++ T++ + EP + A+++ W +M++
Sbjct: 1 MLTRSKAGINKLNPK------------YSLTITTTIKK--EPKSVIFALKDPGWCQAMQE 46
Query: 59 EFQALMKNKTWTLTPRLPHMNVLGCKWVFKVKHNSDGTLQRYKARLVAQGFNQQEGVDYL 118
E AL +NKTW L P + N+LGCKWVFK K +SDGTL R KARLVA+GF+Q+EG+ ++
Sbjct: 47 ELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFV 106
Query: 119 ETFSPVVKIQTVRVVLTLA 137
ET+SPVV+ T+R +L +A
Sbjct: 107 ETYSPVVRTATIRTILNVA 125
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 85.5 bits (210), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 50/78 (64%)
Query: 337 YVTLTRPDLTFSVNYLSQFMHQPRSRHLILLKKALRYLKGTIGAGITITPGDCALLSGFS 396
Y+T+TRPDLTF+VN LSQF R+ + + K L Y+KGT+G G+ + L F+
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 397 DSDWGGCPDTRRSTNDYC 414
DSDW CPDTRRS +C
Sbjct: 62 DSDWASCPDTRRSVTGFC 79