BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000113.1_g0190.1
         (161 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G36885.1 | translation initiation factor | Chr2:15482167-1548...   271   3e-93
AT2G36885.2 | translation initiation factor | Chr2:15482167-1548...   267   1e-91

>AT2G36885.1 | translation initiation factor |
           Chr2:15482167-15483676 REVERSE LENGTH=256 | 201606
          Length = 256

 Score =  271 bits (693), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 127/157 (80%), Positives = 141/157 (89%)

Query: 5   ASTVRGLFEPFVEVINSLNLPDWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDSVEEK 64
           A TVR +F P VE++ SLNLPDWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSD +EEK
Sbjct: 100 AETVRSVFGPVVEIVKSLNLPDWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDDIEEK 159

Query: 65  ANAKDLHPKLLGGMFFFFSLGATGGIMSLLTADKPILESPHAVTAFIGLALLTIQTILPS 124
           A AKDLHPKLL GMFFFF+LGATGG++SLLT+DKPI ESPHAVT  IGL LLT+QTILPS
Sbjct: 160 AKAKDLHPKLLAGMFFFFALGATGGVISLLTSDKPIFESPHAVTGLIGLGLLTVQTILPS 219

Query: 125 LFEGNPGLRNVHGVLGSGIMSLFLIHAALGLQLGLSY 161
           LF+  P LRNVHG+LGSGIM+LFL+HAA GLQLGLS+
Sbjct: 220 LFKEKPELRNVHGILGSGIMALFLVHAAFGLQLGLSF 256


>AT2G36885.2 | translation initiation factor |
           Chr2:15482167-15483676 REVERSE LENGTH=255 | 201606
          Length = 255

 Score =  267 bits (683), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 127/157 (80%), Positives = 141/157 (89%), Gaps = 1/157 (0%)

Query: 5   ASTVRGLFEPFVEVINSLNLPDWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDSVEEK 64
           A TVR +F P VE++ SLNLPDWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSD +EEK
Sbjct: 100 AETVRSVFGPVVEIVKSLNLPDWLVHWGHPGNMAVVLFAMGGYGTYLGFRIRYSDDIEEK 159

Query: 65  ANAKDLHPKLLGGMFFFFSLGATGGIMSLLTADKPILESPHAVTAFIGLALLTIQTILPS 124
           A AKDLHPKLL GMFFFF+LGATGG++SLLT+DKPI ESPHAVT  IGL LLT+QTILPS
Sbjct: 160 AKAKDLHPKLLAGMFFFFALGATGGVISLLTSDKPIFESPHAVTGLIGLGLLTVQTILPS 219

Query: 125 LFEGNPGLRNVHGVLGSGIMSLFLIHAALGLQLGLSY 161
           LF+  P LRNVHG+LGSGIM+LFL+HAA GLQLGLS+
Sbjct: 220 LFK-KPELRNVHGILGSGIMALFLVHAAFGLQLGLSF 255

Top