BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000113.1_g0260.1
(94 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G02090.1 | hypothetical protein | Chr5:412350-412607 REVERSE ... 49 8e-09
AT2G37750.1 | hypothetical protein | Chr2:15831017-15831265 FORW... 39 4e-05
>AT5G02090.1 | hypothetical protein | Chr5:412350-412607 REVERSE
LENGTH=85 | 201606
Length = 85
Score = 48.5 bits (114), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 1 MEGLIPFVIRAIVQYKTGGEQTPIAGSGSSWFSESPSASYMRLPTGDSGRFQSPEIQLFR 60
MEGLIPF+ +AIV YK G + + S S S + YMRLP S RF++ +++ F
Sbjct: 1 MEGLIPFLYKAIVMYKREGSFSSVL--LSDHHSPSNAGYYMRLPGDSSSRFRTSDLRRFG 58
Query: 61 PD----CNTSSSSSSMVVSTSATTQ 81
D T+ SSS VST T+
Sbjct: 59 TDRFGMLETTPSSSPSRVSTRNITK 83
>AT2G37750.1 | hypothetical protein | Chr2:15831017-15831265
FORWARD LENGTH=82 | 201606
Length = 82
Score = 38.9 bits (89), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 12/51 (23%)
Query: 1 MEGLIPFVIRAIVQYKTGGEQTPIAGSGSSWFSESPSASYMRLPTGDSGRF 51
MEGLIP V +A++Q + G E ++ S+ Y+RLP GDSGRF
Sbjct: 1 MEGLIPLVYKAVMQIRYGNESQQLS-----------SSYYVRLP-GDSGRF 39