BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000113.1_g0300.1
(136 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 44 1e-05
AT3G23320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 43 1e-05
>AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr5:25967824-25968615 FORWARD
LENGTH=263 | 201606
Length = 263
Score = 43.9 bits (102), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Query: 33 KQQQWCPPSTQFLKINIDASFTNLSEPAGIGCIIFDAQAKFISTLADSIRGQ-NAEECEC 91
+ +W PP LK N DAS + +G+G I+ ++Q I +G+ EE EC
Sbjct: 101 RNTKWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAEC 160
Query: 92 LAIKYALQWAINLRILHVHIESDKLNVIKYLEDQS 126
+ +A+Q + V E D + + + +S
Sbjct: 161 STLIWAIQASYGFGHKKVIFEGDNQTITRMINTKS 195
>AT3G23320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr3:8344629-8345204 FORWARD
LENGTH=191 | 201606
Length = 191
Score = 43.1 bits (100), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 28 KVKEPKQQQWCPPSTQFLKINIDASFTNLSEPAGIGCIIFDAQAKFISTLADSIRG-QNA 86
+ K + +W P +++K N D S + +G+ II ++Q + +G Q
Sbjct: 21 QTKSSRTDKWQKPGAEWVKCNYDVSNHAGRQDSGLRWIIRNSQGTCLDCGCGKFQGRQTI 80
Query: 87 EECECLAIKYALQWAINLRILHVHIESDKLNVIKYLEDQ 125
+E EC A+ +A+Q A +L V E D + V + + ++
Sbjct: 81 KEAECTALIWAIQCAWDLGYRRVEFEGDNITVNRLIRNK 119