BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000113.1_g0330.1
(265 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 161 1e-44
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 161 1e-44
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 104 1e-26
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 71 2e-15
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 161 bits (407), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 109/165 (66%)
Query: 1 MTRPDISFFVNYLNQFMQNPHSNHMDAATRVLSYLKGTMNHDLLLSSSSTLTIFGFTDSD 60
+TR DISF VN L+QF + P H A ++L Y+KGT+ L SS + + + F+D+
Sbjct: 390 ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDAS 449
Query: 61 WASFPITRCLTTGYFTMLGSRSLSRKSKKQPTVSQSSAEAEHRTLATLTAELQWLQYLFQ 120
+ S TR T GY LG+ +S KSKKQ VS+SSAEAE+R L+ T E+ WL F+
Sbjct: 450 FQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFR 509
Query: 121 DLLVPIPEPFQVFCDNMAAMHIAANPVFHEQTKHIEIDCHFVREK 165
+L +P+ +P +FCDN AA+HIA N VFHE+TKHIE DCH VRE+
Sbjct: 510 ELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRER 554
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 161 bits (407), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 109/165 (66%)
Query: 1 MTRPDISFFVNYLNQFMQNPHSNHMDAATRVLSYLKGTMNHDLLLSSSSTLTIFGFTDSD 60
+TR DISF VN L+QF + P H A ++L Y+KGT+ L SS + + + F+D+
Sbjct: 390 ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDAS 449
Query: 61 WASFPITRCLTTGYFTMLGSRSLSRKSKKQPTVSQSSAEAEHRTLATLTAELQWLQYLFQ 120
+ S TR T GY LG+ +S KSKKQ VS+SSAEAE+R L+ T E+ WL F+
Sbjct: 450 FQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFR 509
Query: 121 DLLVPIPEPFQVFCDNMAAMHIAANPVFHEQTKHIEIDCHFVREK 165
+L +P+ +P +FCDN AA+HIA N VFHE+TKHIE DCH VRE+
Sbjct: 510 ELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRER 554
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 104 bits (259), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 69/114 (60%)
Query: 1 MTRPDISFFVNYLNQFMQNPHSNHMDAATRVLSYLKGTMNHDLLLSSSSTLTIFGFTDSD 60
+TRPDIS+ VN + Q M P D RVL Y+KGT+ H L + +S L + F DSD
Sbjct: 112 LTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSD 171
Query: 61 WASFPITRCLTTGYFTMLGSRSLSRKSKKQPTVSQSSAEAEHRTLATLTAELQW 114
WA TR TTG+ T LG +S +K+QPTVS+SS E E+R LA AEL W
Sbjct: 172 WAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 70.9 bits (172), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 1 MTRPDISFFVNYLNQFMQNPHSNHMDAATRVLSYLKGTMNHDLLLSSSSTLTIFGFTDSD 60
+TRPD++F VN L+QF + M A +VL Y+KGT+ L S++S L + F DSD
Sbjct: 5 ITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSD 64
Query: 61 WASFPITRCLTTGYFTMLGSRSLS--RKSKKQPTVSQ-SSAEAEH 102
WAS P TR TG+ +++ L RKS P + Q + EA H
Sbjct: 65 WASCPDTRRSVTGFCSLVPLWFLGALRKSILSPGLLQRQNIEALH 109