BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000113.1_g0340.1
(182 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G42905.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 50 1e-07
>AT5G42905.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr5:17201414-17202323 REVERSE
LENGTH=258 | 201606
Length = 258
Score = 50.4 bits (119), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 46/109 (42%), Gaps = 4/109 (3%)
Query: 13 LITSRSSTVLQAQEWIPPAFGRININVDGGYRNN---GAAAAVARDWRGEIADSLSLAFA 69
L+ S V + W+ P G + +N DG R N +A V RD G SL
Sbjct: 126 LVGSTQPRVERLIGWVLPCVGWVKVNTDGASRGNPGLASAGGVLRDCEGAWCGGFSLNIG 185
Query: 70 LVSPLHNEVKGFGLGLELVEKLDLDRFDLESDSLLVVNLIMDG-QDTSP 117
S H E+ G GL + + R +LE DS +V + G D+ P
Sbjct: 186 RCSAQHAELWGVYYGLYFAWEKKVPRVELEVDSEAIVGFLKTGISDSHP 234