BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000113.1_g0480.1
(118 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G20160.1 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family pro... 189 1e-63
AT4G22380.1 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family pro... 189 2e-63
AT4G12600.1 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family pro... 188 5e-63
AT5G20160.2 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family pro... 177 2e-58
AT4G12600.2 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family pro... 127 2e-38
>AT5G20160.1 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
protein | Chr5:6804075-6805102 REVERSE LENGTH=128 |
201606
Length = 128
Score = 189 bits (481), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 107/128 (83%), Positives = 111/128 (86%), Gaps = 10/128 (7%)
Query: 1 MTAEAVNPKAYPLADAQLTITILDLIQQAANYKQLKKGANE----------EFVVMAADT 50
MT E VNPKAYPLAD+QL+ITILDL+QQA NYKQLKKGANE EFVVMAAD
Sbjct: 1 MTGEVVNPKAYPLADSQLSITILDLVQQATNYKQLKKGANEATKTLNRGISEFVVMAADA 60
Query: 51 EPLEILLHLPLLAEDKNVPYVFVPSKEALGRACGVTRPVIACSVTSNEGSQLKSQILQLK 110
EPLEILLHLPLLAEDKNVPYVFVPSK+ALGRACGVTRPVIACSVTSNE SQLKSQI LK
Sbjct: 61 EPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKSQIQHLK 120
Query: 111 DAIEKLLI 118
DAIEKLLI
Sbjct: 121 DAIEKLLI 128
>AT4G22380.1 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
protein | Chr4:11812041-11812922 REVERSE LENGTH=128 |
201606
Length = 128
Score = 189 bits (480), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 106/128 (82%), Positives = 111/128 (86%), Gaps = 10/128 (7%)
Query: 1 MTAEAVNPKAYPLADAQLTITILDLIQQAANYKQLKKGANE----------EFVVMAADT 50
MT E VNPKAYPLAD+QL+ITI+DL+QQA NYKQLKKGANE EFVVMAAD
Sbjct: 1 MTGEVVNPKAYPLADSQLSITIMDLVQQATNYKQLKKGANEATKTLNRGISEFVVMAADA 60
Query: 51 EPLEILLHLPLLAEDKNVPYVFVPSKEALGRACGVTRPVIACSVTSNEGSQLKSQILQLK 110
EPLEILLHLPLLAEDKNVPYVFVPSK+ALGRACGVTRPVIACSVTSNE SQLKSQI LK
Sbjct: 61 EPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKSQIQHLK 120
Query: 111 DAIEKLLI 118
DAIEKLLI
Sbjct: 121 DAIEKLLI 128
>AT4G12600.1 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
protein | Chr4:7453296-7454208 FORWARD LENGTH=128 |
201606
Length = 128
Score = 188 bits (477), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 106/128 (82%), Positives = 111/128 (86%), Gaps = 10/128 (7%)
Query: 1 MTAEAVNPKAYPLADAQLTITILDLIQQAANYKQLKKGANE----------EFVVMAADT 50
MT E VNPKAYPLAD+QL+ITILDL+QQA NYKQLKKGANE EF+VMAADT
Sbjct: 1 MTVEGVNPKAYPLADSQLSITILDLVQQATNYKQLKKGANEATKTLNRGISEFIVMAADT 60
Query: 51 EPLEILLHLPLLAEDKNVPYVFVPSKEALGRACGVTRPVIACSVTSNEGSQLKSQILQLK 110
EPLEILLHLPLLAEDKNVPYVFVPSK+ALGRAC VTRPVIACSVTSNE SQLKSQI LK
Sbjct: 61 EPLEILLHLPLLAEDKNVPYVFVPSKQALGRACDVTRPVIACSVTSNEASQLKSQIQHLK 120
Query: 111 DAIEKLLI 118
DAIEKLLI
Sbjct: 121 DAIEKLLI 128
>AT5G20160.2 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
protein | Chr5:6804075-6805102 REVERSE LENGTH=160 |
201606
Length = 160
Score = 177 bits (449), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/160 (66%), Positives = 111/160 (69%), Gaps = 42/160 (26%)
Query: 1 MTAEAVNPKAYPLADAQLTITILDLIQQAANYKQLKKGANE------------------- 41
MT E VNPKAYPLAD+QL+ITILDL+QQA NYKQLKKGANE
Sbjct: 1 MTGEVVNPKAYPLADSQLSITILDLVQQATNYKQLKKGANEGIRLLLMCVCLSYLLSLMF 60
Query: 42 -----------------------EFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKEA 78
EFVVMAAD EPLEILLHLPLLAEDKNVPYVFVPSK+A
Sbjct: 61 VKLFLIYLNLFISATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQA 120
Query: 79 LGRACGVTRPVIACSVTSNEGSQLKSQILQLKDAIEKLLI 118
LGRACGVTRPVIACSVTSNE SQLKSQI LKDAIEKLLI
Sbjct: 121 LGRACGVTRPVIACSVTSNEASQLKSQIQHLKDAIEKLLI 160
>AT4G12600.2 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
protein | Chr4:7453296-7454208 FORWARD LENGTH=183 |
201606
Length = 183
Score = 127 bits (320), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/183 (50%), Positives = 100/183 (54%), Gaps = 65/183 (35%)
Query: 1 MTAEAVNPKAYPLADAQLTITILDLIQQAANYKQLKKGANE----------EFVVMAADT 50
MT E VNPKAYPLAD+QL+ITILDL+QQA NYKQLKKGANE EF+VMAADT
Sbjct: 1 MTVEGVNPKAYPLADSQLSITILDLVQQATNYKQLKKGANEATKTLNRGISEFIVMAADT 60
Query: 51 EPLEILLHLPLLAEDKNVPYVFVPSKE---------ALGRACGVT--------------- 86
EPLEILLHLPLLAEDK ++ + S AL G T
Sbjct: 61 EPLEILLHLPLLAEDKVFEFLLIVSLSYESQLVVSLALASFTGFTWVSSSYDKKIRLYWL 120
Query: 87 -------------------------------RPVIACSVTSNEGSQLKSQILQLKDAIEK 115
RPVIACSVTSNE SQLKSQI LKDAIEK
Sbjct: 121 LDSSFEIVIVDNVPYVFVPSKQALGRACDVTRPVIACSVTSNEASQLKSQIQHLKDAIEK 180
Query: 116 LLI 118
LLI
Sbjct: 181 LLI 183