BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000113.1_g0520.1
(160 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G02020.1 | E3 ubiquitin-protein ligase RLIM-like protein | Ch... 105 1e-29
AT5G59080.2 | hypothetical protein | Chr5:23847691-23848403 REVE... 100 2e-27
AT5G59080.1 | hypothetical protein | Chr5:23847691-23848403 REVE... 100 2e-27
AT3G46880.2 | hypothetical protein | Chr3:17265293-17266199 FORW... 78 4e-19
AT2G39855.4 | plant/protein | Chr2:16637845-16638852 FORWARD LEN... 75 1e-17
>AT5G02020.1 | E3 ubiquitin-protein ligase RLIM-like protein |
Chr5:386557-387921 REVERSE LENGTH=149 | 201606
Length = 149
Score = 105 bits (263), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 84/145 (57%), Gaps = 22/145 (15%)
Query: 21 ELFGCKGSSSSSSFSSSSSSSSSSGIFDSVFSTPATILGKESSRSSMIS--SWNIKQESS 78
ELFG + + SS SSSGI S+F P+ +LG+ES R ++ WN K +
Sbjct: 22 ELFGSR---------ENPSSPSSSGILGSIFPPPSKVLGRESVRQETVTGGCWNEKTSKT 72
Query: 79 GSYKQNNK--GENRNSMYQH-EKVDPCYLSSSLYYGGQDLYSNPSTTQNYESSHTYKKDN 135
G N+ EN S YQ ++V PC+LSSS+YYGG D+Y P QN S+ T KKD
Sbjct: 73 GGNVDRNREQQENHGSGYQQDQRVQPCHLSSSIYYGGPDVYFQP---QNSTSNSTNKKDG 129
Query: 136 DEDDPNGNNSNSASRGNWWQGSLYY 160
EDD S SASRGNWWQGSLYY
Sbjct: 130 GEDD-----SGSASRGNWWQGSLYY 149
>AT5G59080.2 | hypothetical protein | Chr5:23847691-23848403 REVERSE
LENGTH=135 | 201606
Length = 135
Score = 100 bits (248), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 92/161 (57%), Gaps = 27/161 (16%)
Query: 1 MEGSGKPGGRSSSSSSSFTSELFGCKGSSSSSSFSSSSSSSSSSGIFDSVFSTPATILGK 60
MEG G+ G SSS+SSSFT+ELFG K S SSSSGIF ++F P+ +
Sbjct: 1 MEGKGRVG-SSSSTSSSFTAELFGSK---------DPSPPSSSSGIFSTMFPHPSKGSAR 50
Query: 61 ESSRSSMISSWNIKQESSGSYKQNNKGENRNSM-YQHEKVDPCYLSSSLYYGGQDLYSNP 119
+ S S K ++ + R S+ Q ++V+PC+LSSSLYYGGQD+Y+
Sbjct: 51 DGSNS----------------KHGSQAQRRESLNAQEDRVEPCHLSSSLYYGGQDVYARS 94
Query: 120 STTQNYESSHTYKKDNDEDDPNGNNSNSASRGNWWQGSLYY 160
+T Q Y ++ + EDD NG N SRGNWWQGSLYY
Sbjct: 95 TTNQTYPPVKNDRRRSGEDDANGQNPQDVSRGNWWQGSLYY 135
>AT5G59080.1 | hypothetical protein | Chr5:23847691-23848403 REVERSE
LENGTH=135 | 201606
Length = 135
Score = 100 bits (248), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 92/161 (57%), Gaps = 27/161 (16%)
Query: 1 MEGSGKPGGRSSSSSSSFTSELFGCKGSSSSSSFSSSSSSSSSSGIFDSVFSTPATILGK 60
MEG G+ G SSS+SSSFT+ELFG K S SSSSGIF ++F P+ +
Sbjct: 1 MEGKGRVG-SSSSTSSSFTAELFGSK---------DPSPPSSSSGIFSTMFPHPSKGSAR 50
Query: 61 ESSRSSMISSWNIKQESSGSYKQNNKGENRNSM-YQHEKVDPCYLSSSLYYGGQDLYSNP 119
+ S S K ++ + R S+ Q ++V+PC+LSSSLYYGGQD+Y+
Sbjct: 51 DGSNS----------------KHGSQAQRRESLNAQEDRVEPCHLSSSLYYGGQDVYARS 94
Query: 120 STTQNYESSHTYKKDNDEDDPNGNNSNSASRGNWWQGSLYY 160
+T Q Y ++ + EDD NG N SRGNWWQGSLYY
Sbjct: 95 TTNQTYPPVKNDRRRSGEDDANGQNPQDVSRGNWWQGSLYY 135
>AT3G46880.2 | hypothetical protein | Chr3:17265293-17266199 FORWARD
LENGTH=116 | 201606
Length = 116
Score = 78.2 bits (191), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 81/160 (50%), Gaps = 44/160 (27%)
Query: 1 MEGSGKPGGRSSSSSSSFTSELFGCKGSSSSSSFSSSSSSSSSSGIFDSVFSTPATILGK 60
MEG G+ G SSSSSSFT++LFG K SSS++F+S IF T IL
Sbjct: 1 MEGKGRVG---SSSSSSFTAQLFGPKEPSSSANFNS---------IFPPSKGTARNILSS 48
Query: 61 ESSRSSMISSWNIKQESSGSYKQNNKGENRNSMYQHEKVDPCYLSSSLYYGGQDLYSNPS 120
+ S+ Q ++ C LSSSLYYGGQD+YS+P+
Sbjct: 49 K----------------------------HGSLEQRKEAGTCNLSSSLYYGGQDVYSHPT 80
Query: 121 TTQNYESSHTYKKDNDEDDPNGNNSNSASRGNWWQGSLYY 160
Y T KD + D+ N NS+ ASRGNWWQGSLYY
Sbjct: 81 HNHTYP---TINKDQNRDN-NDANSSDASRGNWWQGSLYY 116
>AT2G39855.4 | plant/protein | Chr2:16637845-16638852 FORWARD
LENGTH=142 | 201606
Length = 142
Score = 74.7 bits (182), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 36 SSSSSSSSSGIFDSVFSTPATIL-GKESSRSSMISSWNIKQESSGSYKQNNKGENRNSMY 94
S S SSS++G+F S+F P+ + G +SR+ E+ + +K + R S
Sbjct: 27 SHSYSSSTTGLFKSIFPPPSAVTQGNLTSRNGAAKYQPTNFETPNERGERSKNKERKSYQ 86
Query: 95 QHEKVDPCYLSSSLYYGGQDLYSNPSTTQNYESSHTYKKDNDEDDPNGNNSNSASRGNWW 154
E PC LSSS+YYGGQD YS+ +T + YKKD +E D S SASRGNWW
Sbjct: 87 SEETQPPCNLSSSIYYGGQDNYSSSTTNPD-----AYKKDGEEGD-----SESASRGNWW 136
Query: 155 QGSLYY 160
+GS Y
Sbjct: 137 EGSFNY 142