BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000113.1_g0570.1
(83 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G29530.2 | Tim10/DDP family zinc finger protein | Chr2:126410... 123 2e-38
AT2G29530.1 | Tim10/DDP family zinc finger protein | Chr2:126410... 123 2e-38
AT2G29530.3 | Tim10/DDP family zinc finger protein | Chr2:126410... 108 2e-32
>AT2G29530.2 | Tim10/DDP family zinc finger protein |
Chr2:12641026-12642243 REVERSE LENGTH=83 | 201606
Length = 83
Score = 123 bits (308), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 53/72 (73%), Positives = 62/72 (86%)
Query: 12 REQIFGVAEKEMEYRVELFNRLTQTCFQKCIDKRYKEAELHMGENSCIDRCVSKYWQVTN 71
+EQ F +A+ EMEYRVELFN+L QTCF KC+DKRYKEAEL+MGENSCIDRCVSKYWQV
Sbjct: 11 KEQAFSMAQTEMEYRVELFNKLAQTCFNKCVDKRYKEAELNMGENSCIDRCVSKYWQVNG 70
Query: 72 LVGQLLGSNRPA 83
+VGQLL + +P
Sbjct: 71 MVGQLLSAGKPP 82
>AT2G29530.1 | Tim10/DDP family zinc finger protein |
Chr2:12641026-12642243 REVERSE LENGTH=83 | 201606
Length = 83
Score = 123 bits (308), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 53/72 (73%), Positives = 62/72 (86%)
Query: 12 REQIFGVAEKEMEYRVELFNRLTQTCFQKCIDKRYKEAELHMGENSCIDRCVSKYWQVTN 71
+EQ F +A+ EMEYRVELFN+L QTCF KC+DKRYKEAEL+MGENSCIDRCVSKYWQV
Sbjct: 11 KEQAFSMAQTEMEYRVELFNKLAQTCFNKCVDKRYKEAELNMGENSCIDRCVSKYWQVNG 70
Query: 72 LVGQLLGSNRPA 83
+VGQLL + +P
Sbjct: 71 MVGQLLSAGKPP 82
>AT2G29530.3 | Tim10/DDP family zinc finger protein |
Chr2:12641026-12642243 REVERSE LENGTH=107 | 201606
Length = 107
Score = 108 bits (270), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 61/96 (63%), Gaps = 24/96 (25%)
Query: 12 REQIFGVAEKEMEYRVELFNR------------------------LTQTCFQKCIDKRYK 47
+EQ F +A+ EMEYRVELFN L QTCF KC+DKRYK
Sbjct: 11 KEQAFSMAQTEMEYRVELFNNDIYKLEEYKFETADMSKILRLPELLAQTCFNKCVDKRYK 70
Query: 48 EAELHMGENSCIDRCVSKYWQVTNLVGQLLGSNRPA 83
EAEL+MGENSCIDRCVSKYWQV +VGQLL + +P
Sbjct: 71 EAELNMGENSCIDRCVSKYWQVNGMVGQLLSAGKPP 106