BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000113.1_g0610.1
(146 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G35695.1 | nuclease HARBI1-like protein | Chr5:13869120-13869... 84 2e-20
AT5G41980.1 | nuclease | Chr5:16793765-16794889 FORWARD LENGTH=3... 70 7e-15
AT3G30525.1 | nuclease | Chr3:12132865-12133498 FORWARD LENGTH=1... 47 5e-07
>AT5G35695.1 | nuclease HARBI1-like protein | Chr5:13869120-13869941
FORWARD LENGTH=211 | 201606
Length = 211
Score = 83.6 bits (205), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 21/144 (14%)
Query: 17 HVIIFKIIRR-PQNPKELFNYRHSSLRNVVERTIGLLKKRFAYLRNAPFHDIDTQGKIVI 75
H+ F RR P+ P ELFN RH SLRNV+ER G+ K RFA ++AP Q +V+
Sbjct: 72 HLQEFAGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVL 131
Query: 76 ACCALHSFLRD-------------GDPDDISSGDDSDRDDDEVNELDGVNLTVQDSEINM 122
C ALH+FLR G+ D+ + + + + +E++ + + QD E
Sbjct: 132 TCAALHNFLRKECRSDEADFPDEVGNEGDVVNNEGNAMNTNEIDNEEPLEAQKQDRE--- 188
Query: 123 VPSQVWTANRDLIAEEMWADNPNL 146
+ +W R +AE+MW D NL
Sbjct: 189 -NTNMW---RKSMAEDMWKDATNL 208
>AT5G41980.1 | nuclease | Chr5:16793765-16794889 FORWARD LENGTH=374
| 201606
Length = 374
Score = 70.5 bits (171), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 62/120 (51%), Gaps = 7/120 (5%)
Query: 28 QNPKELFNYRHSSLRNVVERTIGLLKKRFAYLRNAPFHDIDTQGKIVIACCALHSFLRDG 87
+ KE+FN RH L + RT G LK+RF L +AP + + TQ K+VIA CALH+++R
Sbjct: 245 EEAKEMFNERHKLLHRAIHRTFGALKERFPILLSAPPYPLQTQVKLVIAACALHNYVRLE 304
Query: 88 DPDDISSGDDSDRDDDEVNELDGVNLTVQDSEI-----NMVPSQVWTA--NRDLIAEEMW 140
PDD+ + E E V L + EI P +V + RD IA E+W
Sbjct: 305 KPDDLVFRMFEEETLAEAGEDREVALEEEQVEIVGQEHGFRPEEVEDSLRLRDEIASELW 364
>AT3G30525.1 | nuclease | Chr3:12132865-12133498 FORWARD LENGTH=168
| 201606
Length = 168
Score = 47.0 bits (110), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 17 HVIIFKIIRRPQNPKELFNYRHSSLRNVVERTIGLLKKRFAYLRNAPFHDIDTQGKI 73
H+ F P+N ELFN H+SLR+V+ERT G+ KK++ L + P +++ Q ++
Sbjct: 102 HMSQFYFGPPPRNKHELFNQCHASLRSVIERTFGVWKKKWRILSDFPRYNVHVQKRV 158