BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000113.1_g0620.1
(235 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G02550.4 | Myb/SANT-like DNA-binding domain protein | Chr4:11... 49 1e-06
AT4G02550.2 | Myb/SANT-like DNA-binding domain protein | Chr4:11... 49 1e-06
AT4G02550.3 | Myb/SANT-like DNA-binding domain protein | Chr4:11... 49 2e-06
AT4G02550.5 | Myb/SANT-like DNA-binding domain protein | Chr4:11... 49 2e-06
AT4G02550.1 | Myb/SANT-like DNA-binding domain protein | Chr4:11... 49 2e-06
>AT4G02550.4 | Myb/SANT-like DNA-binding domain protein |
Chr4:1120622-1121629 REVERSE LENGTH=278 | 201606
Length = 278
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 16/111 (14%)
Query: 13 KSKRPTVTWSNLMDEILVNTLYECILVGEKNGNQ--KVINEIFKKAAVV-------ISVE 63
K K V WS MD+ L+ E + V KNGN+ K N+ AA V +++
Sbjct: 14 KHKGRNVIWSVGMDKCLI----EALAVQAKNGNKVDKCFNDKAYTAACVAVNTRFNLNLT 69
Query: 64 NIKA--RMKTFKVHYSAARDAINSSGFTFNSETFRIEAD-DDAWADYVAVS 111
+ KA R+KT K Y RD ++ GF +NS T I+ + D+ W Y+AV+
Sbjct: 70 SQKAINRLKTIKKRYRVMRDILSRDGFWWNSSTKMIDCESDELWRRYIAVN 120
>AT4G02550.2 | Myb/SANT-like DNA-binding domain protein |
Chr4:1120622-1121629 REVERSE LENGTH=278 | 201606
Length = 278
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 16/111 (14%)
Query: 13 KSKRPTVTWSNLMDEILVNTLYECILVGEKNGNQ--KVINEIFKKAAVV-------ISVE 63
K K V WS MD+ L+ E + V KNGN+ K N+ AA V +++
Sbjct: 14 KHKGRNVIWSVGMDKCLI----EALAVQAKNGNKVDKCFNDKAYTAACVAVNTRFNLNLT 69
Query: 64 NIKA--RMKTFKVHYSAARDAINSSGFTFNSETFRIEAD-DDAWADYVAVS 111
+ KA R+KT K Y RD ++ GF +NS T I+ + D+ W Y+AV+
Sbjct: 70 SQKAINRLKTIKKRYRVMRDILSRDGFWWNSSTKMIDCESDELWRRYIAVN 120
>AT4G02550.3 | Myb/SANT-like DNA-binding domain protein |
Chr4:1120622-1121674 REVERSE LENGTH=322 | 201606
Length = 322
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 16/111 (14%)
Query: 13 KSKRPTVTWSNLMDEILVNTLYECILVGEKNGNQ--KVINEIFKKAAVV-------ISVE 63
K K V WS MD+ L+ E + V KNGN+ K N+ AA V +++
Sbjct: 29 KHKGRNVIWSVGMDKCLI----EALAVQAKNGNKVDKCFNDKAYTAACVAVNTRFNLNLT 84
Query: 64 NIKA--RMKTFKVHYSAARDAINSSGFTFNSETFRIEAD-DDAWADYVAVS 111
+ KA R+KT K Y RD ++ GF +NS T I+ + D+ W Y+AV+
Sbjct: 85 SQKAINRLKTIKKRYRVMRDILSRDGFWWNSSTKMIDCESDELWRRYIAVN 135
>AT4G02550.5 | Myb/SANT-like DNA-binding domain protein |
Chr4:1120622-1121629 REVERSE LENGTH=307 | 201606
Length = 307
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 16/111 (14%)
Query: 13 KSKRPTVTWSNLMDEILVNTLYECILVGEKNGNQ--KVINEIFKKAAVV-------ISVE 63
K K V WS MD+ L+ E + V KNGN+ K N+ AA V +++
Sbjct: 14 KHKGRNVIWSVGMDKCLI----EALAVQAKNGNKVDKCFNDKAYTAACVAVNTRFNLNLT 69
Query: 64 NIKA--RMKTFKVHYSAARDAINSSGFTFNSETFRIEAD-DDAWADYVAVS 111
+ KA R+KT K Y RD ++ GF +NS T I+ + D+ W Y+AV+
Sbjct: 70 SQKAINRLKTIKKRYRVMRDILSRDGFWWNSSTKMIDCESDELWRRYIAVN 120
>AT4G02550.1 | Myb/SANT-like DNA-binding domain protein |
Chr4:1120622-1121629 REVERSE LENGTH=307 | 201606
Length = 307
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 16/111 (14%)
Query: 13 KSKRPTVTWSNLMDEILVNTLYECILVGEKNGNQ--KVINEIFKKAAVV-------ISVE 63
K K V WS MD+ L+ E + V KNGN+ K N+ AA V +++
Sbjct: 14 KHKGRNVIWSVGMDKCLI----EALAVQAKNGNKVDKCFNDKAYTAACVAVNTRFNLNLT 69
Query: 64 NIKA--RMKTFKVHYSAARDAINSSGFTFNSETFRIEAD-DDAWADYVAVS 111
+ KA R+KT K Y RD ++ GF +NS T I+ + D+ W Y+AV+
Sbjct: 70 SQKAINRLKTIKKRYRVMRDILSRDGFWWNSSTKMIDCESDELWRRYIAVN 120