BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000113.1_g0640.1
(312 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G38550.1 | Transmembrane proteins 14C | Chr2:16132178-1613422... 269 6e-89
AT3G57280.1 | Transmembrane proteins 14C | Chr3:21193960-2119554... 86 2e-19
AT3G20510.1 | Transmembrane proteins 14C | Chr3:7160884-7161991 ... 49 4e-07
AT1G50740.1 | Transmembrane proteins 14C | Chr1:18807861-1880876... 46 3e-06
>AT2G38550.1 | Transmembrane proteins 14C | Chr2:16132178-16134229
FORWARD LENGTH=335 | 201606
Length = 335
Score = 269 bits (688), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 158/324 (48%), Positives = 211/324 (65%), Gaps = 28/324 (8%)
Query: 4 AHS-PSFYSIRSKTHLLPHVHRFSTTITPRCSFTR-----GFTSHFLSVDQRRKTKDQFI 57
AHS P LLP FS PR + GFTS + +++ +
Sbjct: 22 AHSRPPVKLCAPPRSLLPSRRHFSA---PRAVVSYPGIRFGFTSPEVLLNRS-------V 71
Query: 58 SSFSASHEDSNHSEIEVEKSKSELEAEAEESQEAWKKMLESLKEQTIKMQGMSQEAYELY 117
+F+ASHEDS S +EV K KS+++ E + S+EAWK+ LES KEQ KMQ +S EAY +
Sbjct: 72 VAFAASHEDSGESGVEVGKEKSDIDVEDDTSKEAWKQTLESFKEQVSKMQSVSSEAYSVN 131
Query: 118 SKKAKVILKETSEQLKIQAEKASQELSVIAKEFSEEGKEYLLTAAENSPEEVKDIVETFA 177
S+KA +LKETSEQL+IQAEKA +EL AK SEEG+EY+L AAE SP +VK+IVE FA
Sbjct: 132 SQKAMTVLKETSEQLRIQAEKAKEELGTKAKVVSEEGREYILKAAEESPSDVKEIVEAFA 191
Query: 178 SSSVDLKEPSKVQDFYLGIPYGTLLTALGFLSFMFTGSLSGIRFGVILGGALLALSISSL 237
S+ DLK S+ DF++GIPYG LL GF++FM +GS+ IRFGVILGGAL ALS++SL
Sbjct: 192 STE-DLKNVSRANDFHVGIPYGLLLLVGGFINFMVSGSIPAIRFGVILGGALFALSLASL 250
Query: 238 RSWKRGESSDMALKGQAAITGILFLRDM-LLLSQRPSLPSFLRTFISGSIVVFYLYRIMV 296
+S ++GESS LKGQ AI I+FLR++ LLLSQ+ + F T SG ++ FYLY+++V
Sbjct: 251 KSHRKGESSTKFLKGQMAIVAIIFLRELRLLLSQKSTFLGFFTTLTSGGVLGFYLYKMVV 310
Query: 297 ---------DGNQNKSTN-FERGE 310
DG +++S++ F R E
Sbjct: 311 KREKGPTLEDGGEDESSDGFVRSE 334
>AT3G57280.1 | Transmembrane proteins 14C | Chr3:21193960-21195547
FORWARD LENGTH=226 | 201606
Length = 226
Score = 85.5 bits (210), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
Query: 187 SKVQDFYLGIPYGTLLTALGFLSFMFTGSLSGIRFGVILGGALLALSISSLRSWKRGESS 246
+K+ DF GIPYG L+ + G L F F+ +L+ + GV+ GG LLALS SL+ W+ G+SS
Sbjct: 98 AKIHDFCFGIPYGGLVVSGGLLGFAFSRNLTSLSTGVLYGGGLLALSTLSLKIWREGKSS 157
Query: 247 DMALKGQAAITGILFLRDMLLLSQRPSL-PSFLRTFISGSIVVFYLYRIMVDGN 299
+ GQA ++ ++F ++ S L P+ + IS ++ FY Y ++ GN
Sbjct: 158 FPYILGQAVLSAVVFWKNFTAYSMTKKLFPAGVFAVISACMLCFYSYVVLSGGN 211
>AT3G20510.1 | Transmembrane proteins 14C | Chr3:7160884-7161991
FORWARD LENGTH=119 | 201606
Length = 119
Score = 48.5 bits (114), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 189 VQDFYLGIPYGTLLTALGFLSFMFTGSLSGIRFGVILGGALLALSISSLRSWKRGESSDM 248
+ DF IPYG LL GF+ +M GS++ G G L+ SL+++++ ++S +
Sbjct: 1 MHDFCFTIPYGMLLIGGGFIGYMKKGSITSFAGGAGTGLLLILAGYISLKAFEKKKNSTI 60
Query: 249 ALKGQAAITGILFLRDMLLLSQRPSL-----PSFLRTFISGSIVVFYLYRIMVDGNQ 300
A+ Q I L L++ QR L P+ L IS + FY+Y+I GN+
Sbjct: 61 AMVLQTVIAAAL----TLVMGQRYLLTGKIMPAGLVAGISALMTCFYVYKIATGGNK 113
>AT1G50740.1 | Transmembrane proteins 14C | Chr1:18807861-18808765
FORWARD LENGTH=119 | 201606
Length = 119
Score = 46.2 bits (108), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 189 VQDFYLGIPYGTLLTALGFLSFMFTGSLSGIRFGVILGGALLALSISSLRSWKRGESSDM 248
+ DF IPYG LL GF+ ++ GS++ + G G ++ SL+++++ ++S +
Sbjct: 1 MHDFCFTIPYGILLIVGGFIGYLKKGSIASLAGGAGTGLLVVLAGFISLKAFEKKKTSLL 60
Query: 249 ALKGQAAITGIL-FLRDMLLLSQRPSLPSFLRTFISGSIVVFYLYRIMVDGNQ 300
A + I L F+ L + +P+ L IS + FY+Y+I GN
Sbjct: 61 ATLLETVIAAALTFVMGQRFLQTQKIMPAALVAGISALMTCFYVYKIATGGNH 113