BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000113.1_g0670.1
(154 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 46 4e-06
>AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr5:25967824-25968615 FORWARD
LENGTH=263 | 201606
Length = 263
Score = 45.8 bits (107), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 19/154 (12%)
Query: 1 MWHIRKARCDHCFQHT-----------IHTTSTVIKRIMAFPRMNNVR-KKPLMNTVGKW 48
MW I K+ D F HT ++ T + M + N R P NT KW
Sbjct: 48 MWRIWKSGNDLVFNHTRTKFQTTVEMALNDTKEWLDNTMTNEQQNGNRNADPSRNT--KW 105
Query: 49 RPSNLPFIKINVDAPFIDINTNIGTSMIIHNSQSKFVEAKVQTTWAR-NSEESEAIAILQ 107
P +K N DA + NT G I+ NSQ +E + R +EE+E ++
Sbjct: 106 SPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECSTLIW 165
Query: 108 GIKWAEEHNYKEIIIASDNINLIQHL----KNPR 137
I+ + +K++I DN + + + NPR
Sbjct: 166 AIQASYGFGHKKVIFEGDNQTITRMINTKSSNPR 199