BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000113.1_g0700.1
         (106 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G21280.1 | Copia-like polyprotein/retrotransposon | Chr1:7447...    82   2e-20

>AT1G21280.1 | Copia-like polyprotein/retrotransposon |
           Chr1:7447690-7448403 REVERSE LENGTH=237 | 201606
          Length = 237

 Score = 82.4 bits (202), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 1/92 (1%)

Query: 9   LRAKDKFAFVDGTLPRPTSPTDLH-PWNRCNDLVTSWLLNSVDPNIRQSIPYDDNAAKIW 67
           LR   KF F+DGTLP+P   + L+ PW +CN +V  WL+NS+   + +S+ Y + A K+W
Sbjct: 53  LRVTKKFGFIDGTLPKPDPFSPLYQPWEQCNAMVMYWLMNSMTDKLLESVMYAETAHKMW 112

Query: 68  RNLHERFYQTNALKIFQLKRVISCLRQDGSNA 99
            +L   F     LKI+QL+R ++ LRQ G + 
Sbjct: 113 EDLRRVFVPCVDLKIYQLRRRLATLRQGGDSV 144

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