BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000113.1_g0740.1
(215 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 54 3e-08
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 50 6e-07
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 12/166 (7%)
Query: 58 IGDLNLITSLSEKFGG-TNSVPF--MAEFKAFICNTGLIHLRFNGPAYTWTNNRAHGALT 114
+GD + I + S+ + S+P + EF+ + ++ L+ + G YTW+N++ +
Sbjct: 224 VGDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNPII 283
Query: 115 RERLDRVLASTSWLEMFPNA-GVFHLPRYHSYHCPILLKTEVRGSVVPSQVKFESFWLKN 173
R +LDR +A+ W FP+A VF L S H P ++ E ++ SF +
Sbjct: 284 R-KLDRAIANGDWFSSFPSAIAVFELSGV-SDHSPCIIILENLPKRSKKCFRYFSFLSTH 341
Query: 174 DGYKAQLGYHWHQADPV------LLQRLQGVKEKLHIWGKSSFGNL 213
+ L W + PV L + L+ K+ + + FGN+
Sbjct: 342 PTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNI 387
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 54 PHCCIGDLNLITSLSEKFG---GTNSVPFMAEFKAFICNTGLIHLRFNGPAYTWTNNRAH 110
P +GD N I S++E + S+ + + +A + ++ L+ L G YTW+N++
Sbjct: 121 PWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQACMRDSDLVDLPCRGVLYTWSNHQQD 180
Query: 111 GALTRERLDRVLASTSWLEMFPNAGVFHLPRYHSYH--CPILL 151
+ R +LDR + + WL FP A P S H C ++L
Sbjct: 181 NPILR-KLDRAIVNGCWLATFPTASAIFDPPSDSDHAACMVIL 222