BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000113.1_g0840.1
(593 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 272 7e-80
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 272 7e-80
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 118 9e-31
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 93 7e-21
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 59 2e-10
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 272 bits (696), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 137/327 (41%), Positives = 201/327 (61%), Gaps = 10/327 (3%)
Query: 273 FAHYSSSHLLDVAFLSILELPTEPTNYKEASKHHEWVKAMHEEFSALQDNERWSL--VPS 330
F Y L +FL + EP+ Y EA + W AM +E A++ W + +P
Sbjct: 63 FLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPP 122
Query: 331 NDKMNILGCKWVFKLKQKSDGTIERYKARLVAKGFHQQEGVDYEETFSPVVKSNTIRLVL 390
N K +GCKWV+K+K SDGTIERYKARLVAKG+ QQEG+D+ ETFSPV K +++L+L
Sbjct: 123 NKKP--IGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLIL 180
Query: 391 SIAVSRTWQIKQLDVSNAFLHGTLDEAVYMIQPPGFVQKGKET----HVCHLHKALYGLK 446
+I+ + + QLD+SNAFL+G LDE +YM PPG+ + ++ VC+L K++YGLK
Sbjct: 181 AISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLK 240
Query: 447 QAPRAWFNKFATFLYEYGFQKSRSDQSMFVMHSNSEIMVLLLYVDDIILTGSSNTHISNL 506
QA R WF KF+ L +GF +S SD + F+ + + + +L+YVDDII+ +++ + L
Sbjct: 241 QASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDEL 300
Query: 507 ITDLSRQFKMKDLGLLSYFLGIEVTYDKPSSSMMLTQNKYTLQLLKKAGLLNSKPSKLPV 566
+ L FK++DLG L YFLG+E+ + ++ + + Q KY L LL + GLL KPS +P+
Sbjct: 301 KSQLKSCFKLRDLGPLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVPM 358
Query: 567 SSGQRVSIHNGEILSNPTEYRSLVGAL 593
S H+G + YR L+G L
Sbjct: 359 DPSVTFSAHSGGDFVDAKAYRRLIGRL 385
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 272 bits (696), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 137/327 (41%), Positives = 201/327 (61%), Gaps = 10/327 (3%)
Query: 273 FAHYSSSHLLDVAFLSILELPTEPTNYKEASKHHEWVKAMHEEFSALQDNERWSL--VPS 330
F Y L +FL + EP+ Y EA + W AM +E A++ W + +P
Sbjct: 63 FLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPP 122
Query: 331 NDKMNILGCKWVFKLKQKSDGTIERYKARLVAKGFHQQEGVDYEETFSPVVKSNTIRLVL 390
N K +GCKWV+K+K SDGTIERYKARLVAKG+ QQEG+D+ ETFSPV K +++L+L
Sbjct: 123 NKKP--IGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLIL 180
Query: 391 SIAVSRTWQIKQLDVSNAFLHGTLDEAVYMIQPPGFVQKGKET----HVCHLHKALYGLK 446
+I+ + + QLD+SNAFL+G LDE +YM PPG+ + ++ VC+L K++YGLK
Sbjct: 181 AISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLK 240
Query: 447 QAPRAWFNKFATFLYEYGFQKSRSDQSMFVMHSNSEIMVLLLYVDDIILTGSSNTHISNL 506
QA R WF KF+ L +GF +S SD + F+ + + + +L+YVDDII+ +++ + L
Sbjct: 241 QASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDEL 300
Query: 507 ITDLSRQFKMKDLGLLSYFLGIEVTYDKPSSSMMLTQNKYTLQLLKKAGLLNSKPSKLPV 566
+ L FK++DLG L YFLG+E+ + ++ + + Q KY L LL + GLL KPS +P+
Sbjct: 301 KSQLKSCFKLRDLGPLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVPM 358
Query: 567 SSGQRVSIHNGEILSNPTEYRSLVGAL 593
S H+G + YR L+G L
Sbjct: 359 DPSVTFSAHSGGDFVDAKAYRRLIGRL 385
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 118 bits (296), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 70/99 (70%)
Query: 295 EPTNYKEASKHHEWVKAMHEEFSALQDNERWSLVPSNDKMNILGCKWVFKLKQKSDGTIE 354
EP + A K W +AM EE AL N+ W LVP NILGCKWVFK K SDGT++
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86
Query: 355 RYKARLVAKGFHQQEGVDYEETFSPVVKSNTIRLVLSIA 393
R KARLVAKGFHQ+EG+ + ET+SPVV++ TIR +L++A
Sbjct: 87 RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 92.8 bits (229), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 71/110 (64%), Gaps = 3/110 (2%)
Query: 484 MVLLLYVDDIILTGSSNTHISNLITDLSRQFKMKDLGLLSYFLGIEVTYDKPSSSMMLTQ 543
M LLLYVDDI+LTGSSNT ++ LI LS F MKDLG + YFLGI++ S + L+Q
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQ 58
Query: 544 NKYTLQLLKKAGLLNSKPSKLPVSSGQRVSIHNGEILSNPTEYRSLVGAL 593
KY Q+L AG+L+ KP P+ S+ + +P+++RS+VGAL
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKY-PDPSDFRSIVGAL 107
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 59.3 bits (142), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 49 HRHITELGNTLSFHCSLPKNLWFDAFNTAVYIINRVPTPTLKGFSPFETLFHLSPDYTQL 108
+R I E ++ C LPK DA NTAV+IIN+ P+ + P E F P Y+ L
Sbjct: 2 NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61
Query: 109 KIFGCACYPHLGELRKDKLSPKS 131
+ FGC Y H E KL P++
Sbjct: 62 RRFGCVAYIHCDE---GKLKPRA 81