BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000113.1_g0890.1
         (148 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G00980.1 | zinc knuckle (CCHC-type) family protein | Chr4:422...    51   5e-08

>AT4G00980.1 | zinc knuckle (CCHC-type) family protein |
           Chr4:422732-424580 REVERSE LENGTH=488 | 201606
          Length = 488

 Score = 51.2 bits (121), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 11/118 (9%)

Query: 2   ARTRTTLRVIPPNTTNG---EKPEKFKGTNFNRWKLKMMFYLTTLGLVKYLTEEKPTHAE 58
           AR   T   +  ++++G    K  +F G ++  W  +M  +L  L L   L+E  P+   
Sbjct: 173 ARNGDTSEAVDKDSSHGFSVIKISRFDGKSYLYWASQMELFLKQLKLTYVLSEPCPSIGS 232

Query: 59  IEDEAQRTAEI-------EAWKQEDFLCKNYILNSLDDGLYNLYSV-IETSKQLWDTL 108
            +       EI       + W ++D+LC  +++NSL D LY  YS   + +K+LWD L
Sbjct: 233 SQGPETNPREITRADATGKKWLRDDYLCYTHLMNSLSDHLYRRYSQKFKHAKELWDEL 290


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