BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000113.1_g0920.1
         (207 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G29090.1 | Ribonuclease H-like superfamily protein | Chr4:143...    54   1e-08
AT3G25270.1 | Ribonuclease H-like superfamily protein | Chr3:920...    52   7e-08

>AT4G29090.1 | Ribonuclease H-like superfamily protein |
           Chr4:14333528-14335255 FORWARD LENGTH=575 | 201606
          Length = 575

 Score = 54.3 bits (129), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 22/171 (12%)

Query: 3   WKQTPTGKFTTKSYYEEI------KINP-ELPEAIQNFPWKKFWKQSKMIPRIQTFIWKI 55
           W  T +G +T KS Y  +      + +P E+ E   N  ++K WK S+  P+IQ F+WK 
Sbjct: 215 WDYTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSLNPIYQKIWK-SQTSPKIQHFLWKC 273

Query: 56  IHDGLPTLNNIGKRVMNIPQNCLLCEEGEIETIHHLFSDGPKFQELVRLSGIIEVAEIKM 115
           + + LP    +  R ++    C+ C   + ET++HL           RL+  I    I +
Sbjct: 274 LSNSLPVAGALAYRHLSKESACIRCPSCK-ETVNHLLFKC----TFARLTWAISSIPIPL 328

Query: 116 DPK----IYLKKI-LLDETNNNKVWFEITH----LMWEWWKERNEKYFRNH 157
             +    IY+    + +  N N  W + +     L+W  WK RNE  FR  
Sbjct: 329 GGEWADSIYVNLYWVFNLGNGNPQWEKASQLVPWLLWRLWKNRNELVFRGR 379


>AT3G25270.1 | Ribonuclease H-like superfamily protein |
           Chr3:9203934-9204965 REVERSE LENGTH=343 | 201606
          Length = 343

 Score = 52.0 bits (123), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 24/132 (18%)

Query: 37  KFWKQSKMIPRIQTFIWKIIHDGLPTLNNIGKR-VMNIPQNCLLCEEGEIETIHHLFSDG 95
           K WK  K  P+I+ F+WK++   L T +N+ +R + N PQ    C+E   ET  HLF D 
Sbjct: 17  KIWK-LKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQED--ETSQHLFFDC 73

Query: 96  PKFQELVRLSGI----IEVAEIKMDPKIYLKKILLDETNNNK--------VWFEITHLMW 143
              Q++ R SGI    +    I M+ K+   ++LL     N+        +W     ++W
Sbjct: 74  FYAQQVWRASGIPHQELRTTGITMETKM---ELLLSSCLANRQPQLFNLAIW-----ILW 125

Query: 144 EWWKERNEKYFR 155
             WK RN+  F+
Sbjct: 126 RLWKSRNQLVFQ 137

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