BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0010.1
(349 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G64210.1 | alternative oxidase 2 | Chr5:25683965-25685664 REV... 354 e-121
AT3G22370.1 | alternative oxidase 1A | Chr3:7906890-7908416 FORW... 332 e-112
AT3G22360.1 | alternative oxidase 1B | Chr3:7904156-7905384 FORW... 323 e-109
AT3G27620.1 | alternative oxidase 1C | Chr3:10229289-10230595 RE... 319 e-108
AT1G32350.1 | alternative oxidase 1D | Chr1:11667237-11668569 RE... 317 e-107
>AT5G64210.1 | alternative oxidase 2 | Chr5:25683965-25685664
REVERSE LENGTH=353 | 201606
Length = 353
Score = 354 bits (908), Expect = e-121, Method: Compositional matrix adjust.
Identities = 190/350 (54%), Positives = 224/350 (64%), Gaps = 94/350 (26%)
Query: 47 ASFSPF-LGFSQVTRSFSSSPPGSSSAASVESALAEKDQKKNSSSEEGEKKDG-VIVSSY 104
F F +G V +F+ G SSA SA+ +KD+ N + ++G+ G V V SY
Sbjct: 51 GGFGDFKIGSKHVQGNFNLRWMGMSSA----SAMEKKDE--NLTVKKGQNGGGSVAVPSY 104
Query: 105 WGV--SRPKITREDGTVWPWNCFM------------------------------------ 126
WG+ ++ KITR+DG+ WPWNCFM
Sbjct: 105 WGIETAKMKITRKDGSDWPWNCFMPWETYQANLSIDLKKHHVPKNIADKVAYRIVKLLRI 164
Query: 127 -------KRYGCRAMMLETVAAVPGMVGGMLLHLRSLRKFQHSGGWVKALLEEAENERMH 179
+RYGCRAMMLETVAAVPGMVGGMLLHL+S+RKF+HSGGW+KALLEEAENERMH
Sbjct: 165 PTDIFFQRRYGCRAMMLETVAAVPGMVGGMLLHLKSIRKFEHSGGWIKALLEEAENERMH 224
Query: 180 LMTMVELVQPKWYERLLVLTVQGVFFNAFFALYLITPKVAHRIVGYLEEEAIHSYTEFLK 239
LMTM+ELV+PKWYERLLV+ VQG+FFN+FF Y+I+P++AHR+VGYLEEEAIHSYTEFLK
Sbjct: 225 LMTMMELVKPKWYERLLVMLVQGIFFNSFFVCYVISPRLAHRVVGYLEEEAIHSYTEFLK 284
Query: 240 EIDNGSIKNIPAPAIAIDYWRLPKTATLKDVVTVIRADEAHHRDVNHFASVSFSFKIGWL 299
+IDNG I+N+ APAIAIDYWRLPK ATLKDVVTVIRADEAHHRDVNHFAS
Sbjct: 285 DIDNGKIENVAAPAIAIDYWRLPKDATLKDVVTVIRADEAHHRDVNHFAS---------- 334
Query: 300 LLNKLTRHKKNEPYDSHHTGTILMYGYGVLQDIHFQGKELREAAAPLGYH 349
DI QGKELREAAAP+GYH
Sbjct: 335 -------------------------------DIRNQGKELREAAAPIGYH 353
>AT3G22370.1 | alternative oxidase 1A | Chr3:7906890-7908416 FORWARD
LENGTH=354 | 201606
Length = 354
Score = 332 bits (850), Expect = e-112, Method: Compositional matrix adjust.
Identities = 169/327 (51%), Positives = 202/327 (61%), Gaps = 86/327 (26%)
Query: 68 GSSSAASVESALAEKDQKKNSSSEE--GEKKDGVIVSSYWGVSRPKITREDGTVWPWNCF 125
G + E A +K + +++ + G K ++SYWGV KIT+EDG+ W WNCF
Sbjct: 69 GEKTPMKEEDANQKKTENESTGGDAAGGNNKGDKGIASYWGVEPNKITKEDGSEWKWNCF 128
Query: 126 -------------------------------------------MKRYGCRAMMLETVAAV 142
+RYGCRAMMLETVAAV
Sbjct: 129 RPWETYKADITIDLKKHHVPTTFLDRIAYWTVKSLRWPTDLFFQRRYGCRAMMLETVAAV 188
Query: 143 PGMVGGMLLHLRSLRKFQHSGGWVKALLEEAENERMHLMTMVELVQPKWYERLLVLTVQG 202
PGMVGGMLLH +SLR+F+ SGGW+KALLEEAENERMHLMT +E+ +PKWYER LV+TVQG
Sbjct: 189 PGMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVITVQG 248
Query: 203 VFFNAFFALYLITPKVAHRIVGYLEEEAIHSYTEFLKEIDNGSIKNIPAPAIAIDYWRLP 262
VFFNA+F YLI+PK AHR+VGYLEEEAIHSYTEFLKE+D G+I+N+PAPAIAIDYWRLP
Sbjct: 249 VFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWRLP 308
Query: 263 KTATLKDVVTVIRADEAHHRDVNHFASVSFSFKIGWLLLNKLTRHKKNEPYDSHHTGTIL 322
ATL+DVV V+RADEAHHRDVNHFAS
Sbjct: 309 ADATLRDVVMVVRADEAHHRDVNHFAS--------------------------------- 335
Query: 323 MYGYGVLQDIHFQGKELREAAAPLGYH 349
DIH+QG+EL+EA AP+GYH
Sbjct: 336 --------DIHYQGRELKEAPAPIGYH 354
>AT3G22360.1 | alternative oxidase 1B | Chr3:7904156-7905384 FORWARD
LENGTH=325 | 201606
Length = 325
Score = 323 bits (828), Expect = e-109, Method: Compositional matrix adjust.
Identities = 163/312 (52%), Positives = 196/312 (62%), Gaps = 85/312 (27%)
Query: 81 EKDQKKNSSSEEGEKKDGVIVSSYWGVSRPKITREDGTVWPWNCF--------------- 125
E+ +++G K + +IVS YWGV KIT+EDGT W W+CF
Sbjct: 56 EEKGSSGGKADQGNKGEQLIVS-YWGVKPMKITKEDGTEWKWSCFRPWETYKSDLTIDLK 114
Query: 126 ----------------------------MKRYGCRAMMLETVAAVPGMVGGMLLHLRSLR 157
+RYGCRAMMLETVAAVPGMVGGML+H +SLR
Sbjct: 115 KHHVPSTLPDKLAYWTVKSLRWPTDLFFQRRYGCRAMMLETVAAVPGMVGGMLVHCKSLR 174
Query: 158 KFQHSGGWVKALLEEAENERMHLMTMVELVQPKWYERLLVLTVQGVFFNAFFALYLITPK 217
+F+ SGGW+KALLEEAENERMHLMT +E+ +P WYER LV+ VQG+FFNA+F YLI+PK
Sbjct: 175 RFEQSGGWIKALLEEAENERMHLMTFMEVAKPNWYERALVIAVQGIFFNAYFLGYLISPK 234
Query: 218 VAHRIVGYLEEEAIHSYTEFLKEIDNGSIKNIPAPAIAIDYWRLPKTATLKDVVTVIRAD 277
AHR+VGYLEEEAIHSYTEFLKE+DNG+I+N+PAPAIAIDYWRL ATL+DVV V+RAD
Sbjct: 235 FAHRMVGYLEEEAIHSYTEFLKELDNGNIENVPAPAIAIDYWRLEADATLRDVVMVVRAD 294
Query: 278 EAHHRDVNHFASVSFSFKIGWLLLNKLTRHKKNEPYDSHHTGTILMYGYGVLQDIHFQGK 337
EAHHRDVNH+AS DIH+QG+
Sbjct: 295 EAHHRDVNHYAS-----------------------------------------DIHYQGR 313
Query: 338 ELREAAAPLGYH 349
EL+EA AP+GYH
Sbjct: 314 ELKEAPAPIGYH 325
>AT3G27620.1 | alternative oxidase 1C | Chr3:10229289-10230595
REVERSE LENGTH=329 | 201606
Length = 329
Score = 319 bits (817), Expect = e-108, Method: Compositional matrix adjust.
Identities = 160/303 (52%), Positives = 194/303 (64%), Gaps = 85/303 (28%)
Query: 90 SEEGEKKDGVIVSSYWGVSRPKITREDGTVWPWNCF------------------------ 125
+++G K + +IVS YWGV KIT+EDGT W W+CF
Sbjct: 69 NDQGNKGEQLIVS-YWGVKPMKITKEDGTEWKWSCFRPWETYKADLTIDLKKHHVPSTLP 127
Query: 126 -------------------MKRYGCRAMMLETVAAVPGMVGGMLLHLRSLRKFQHSGGWV 166
+RYGCRA+MLETVAAVPGMVGGML+H +SLR+F+ SGGW+
Sbjct: 128 DKIAYWMVKSLRWPTDLFFQRRYGCRAIMLETVAAVPGMVGGMLMHFKSLRRFEQSGGWI 187
Query: 167 KALLEEAENERMHLMTMVELVQPKWYERLLVLTVQGVFFNAFFALYLITPKVAHRIVGYL 226
KALLEEAENERMHLMT +E+ +PKWYER LV++VQGVFFNA+ Y+I+PK AHR+VGYL
Sbjct: 188 KALLEEAENERMHLMTFMEVAKPKWYERALVISVQGVFFNAYLIGYIISPKFAHRMVGYL 247
Query: 227 EEEAIHSYTEFLKEIDNGSIKNIPAPAIAIDYWRLPKTATLKDVVTVIRADEAHHRDVNH 286
EEEAIHSYTEFLKE+DNG+I+N+PAPAIA+DYWRL ATL+DVV V+RADEAHHRDVNH
Sbjct: 248 EEEAIHSYTEFLKELDNGNIENVPAPAIAVDYWRLEADATLRDVVMVVRADEAHHRDVNH 307
Query: 287 FASVSFSFKIGWLLLNKLTRHKKNEPYDSHHTGTILMYGYGVLQDIHFQGKELREAAAPL 346
+AS DIH+QG EL+EA AP+
Sbjct: 308 YAS-----------------------------------------DIHYQGHELKEAPAPI 326
Query: 347 GYH 349
GYH
Sbjct: 327 GYH 329
>AT1G32350.1 | alternative oxidase 1D | Chr1:11667237-11668569
REVERSE LENGTH=318 | 201606
Length = 318
Score = 317 bits (811), Expect = e-107, Method: Compositional matrix adjust.
Identities = 156/296 (52%), Positives = 186/296 (62%), Gaps = 84/296 (28%)
Query: 97 DGVIVSSYWGVSRPKITREDGTVWPWNCFM------------------------------ 126
DG ++S+YWG+ KIT+ DG+ W WNCF
Sbjct: 64 DGKVISTYWGIPPTKITKPDGSAWKWNCFQPWDSYKPDVSIDVTKHHKPSNFTDKFAYWT 123
Query: 127 -------------KRYGCRAMMLETVAAVPGMVGGMLLHLRSLRKFQHSGGWVKALLEEA 173
+++ C AM+LETVAAVPGMVGGMLLHL+SLR+F+HSGGW+KALLEEA
Sbjct: 124 VQTLKIPVQLFFQRKHMCHAMLLETVAAVPGMVGGMLLHLKSLRRFEHSGGWIKALLEEA 183
Query: 174 ENERMHLMTMVELVQPKWYERLLVLTVQGVFFNAFFALYLITPKVAHRIVGYLEEEAIHS 233
ENERMHLMT +EL QPKWYER +V TVQGVFFNA+F Y+I+PK+AHRI GYLEEEA++S
Sbjct: 184 ENERMHLMTFIELSQPKWYERAIVFTVQGVFFNAYFLAYVISPKLAHRITGYLEEEAVNS 243
Query: 234 YTEFLKEIDNGSIKNIPAPAIAIDYWRLPKTATLKDVVTVIRADEAHHRDVNHFASVSFS 293
YTEFLK+ID G +N PAPAIAIDYWRLPK ATL+DVV VIRADEAHHRD+NH+AS
Sbjct: 244 YTEFLKDIDAGKFENSPAPAIAIDYWRLPKDATLRDVVYVIRADEAHHRDINHYAS---- 299
Query: 294 FKIGWLLLNKLTRHKKNEPYDSHHTGTILMYGYGVLQDIHFQGKELREAAAPLGYH 349
DI F+G EL+EA AP+GYH
Sbjct: 300 -------------------------------------DIQFKGHELKEAPAPIGYH 318