BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0020.1
(948 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G77680.1 | Ribonuclease II/R family protein | Chr1:29192188-2... 554 0.0
AT2G17510.1 | ribonuclease II family protein | Chr2:7609395-7615... 167 4e-42
AT2G17510.2 | ribonuclease II family protein | Chr2:7609395-7616... 155 2e-38
AT5G02250.1 | Ribonuclease II/R family protein | Chr5:454902-459... 57 5e-08
>AT1G77680.1 | Ribonuclease II/R family protein |
Chr1:29192188-29195963 REVERSE LENGTH=1055 | 201606
Length = 1055
Score = 554 bits (1428), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 288/579 (49%), Positives = 380/579 (65%), Gaps = 38/579 (6%)
Query: 391 VATDLDDALSVELISDDILGVGVHISDVFYFVLPGTPLDVEALTRSTSVYLRQSKLPMLP 450
ATDLDDALSV+ + VGVHI+DV YFVLP T LD EA RSTSVYL Q K+ MLP
Sbjct: 491 TATDLDDALSVQSLPGGFFRVGVHIADVSYFVLPETALDTEARFRSTSVYLMQRKISMLP 550
Query: 451 PLVSENMGSLIPGVDRLAFSIIWDINKLGDIVDRWLGRTVIHSCCKLSYQQAKDIIDGST 510
PL+SEN+GSL PG DRLAFSI+WD+N+ GD++DRW+GRT+I SCCKLSY A+DIIDG +
Sbjct: 551 PLLSENVGSLSPGADRLAFSILWDLNREGDVIDRWIGRTIIRSCCKLSYDHAQDIIDGKS 610
Query: 511 DSGTSGSFCPKIYGQFELQHINRFVKYLHEISKRLRDKRFKDGALRLESSKLVFMFDEFG 570
D +G P ++G F+ + R VK L EIS LR KRF++GAL+LE+SK VF+FDE G
Sbjct: 611 DVAENG--WPALHGSFKWCDVTRSVKQLSEISTTLRQKRFRNGALQLENSKPVFLFDEHG 668
Query: 571 IPKDNSFYEQTDSHSLVEELMLLANNTVAEVISRAFPDCALLRRHLEPNLRKLKEFEAFC 630
+P D + S+ LVEE MLLAN T AEVIS+A+ +LLRRH EPN RKLKEFE FC
Sbjct: 669 VPYDFVTCSRKGSNFLVEEFMLLANMTAAEVISQAYRASSLLRRHPEPNTRKLKEFEGFC 728
Query: 631 QKHGLDLDTSSSRNIQLSLERIKEKLKNDPVFFDILLSYASKPMQLAAYFSTGDFRIRER 690
KHG+DLD SSS +Q SLE+I LK+D VF DIL +YA KPMQLA+YF TG+ +
Sbjct: 729 SKHGMDLDISSSGQLQDSLEKITGNLKDDSVFVDILNNYAIKPMQLASYFCTGNLKDSVA 788
Query: 691 TLTAAIEAEEMY------LQHWRSLV---------------EANKGEAI--ARQCLTDIY 727
A +Y L+ + +V K AI R C T I+
Sbjct: 789 EWGHYALAVPLYTHFTSPLRRYPDIVVHRALAAALEAEELYSKQKQTAIDEGRSCFTGIH 848
Query: 728 FDEATIATKEYKDALFASPSKHKILSAEVLTGLAAYCNTKKMAIKHVENDCDKLYLWAML 787
F++ + E K+AL + KH + S E+L+ +AAYCN +K+A + V + CDKLY W +L
Sbjct: 849 FNKDAAESIEGKEALSVAALKHGVPSTEILSDVAAYCNERKLAARKVRDACDKLYTWFVL 908
Query: 788 KKKQPLVTEARVLALGPKFMSIYIHKFAIERRIYYDEVEGLMTEWLDKTSTLILNITTDK 847
K+K+ EARV+ LG +FM++YI K IERRIYYD++EGL +WL+ TSTLI+ DK
Sbjct: 909 KQKEIFPCEARVMNLGSRFMTVYISKLGIERRIYYDQIEGLCADWLEATSTLIV----DK 964
Query: 848 HFHRRASPGRYRPLEDVAWVISPCDLKQDDFDSENTSPEVGKIQLKDETEPEISNSSDLR 907
+ +R G ++P+++ +++SPC++ + + + D PE + ++
Sbjct: 965 LYSKRGGRGFFKPMKEAVYLVSPCEV---------CVAKCSALSVHDTESPEAVSIDEVA 1015
Query: 908 PSIFPLTVHILSTINIALHAVGGDDGPLDIGARLCMSSY 946
P++FPLT+ + STI + LHAVGGDDGPLDIGARL MSSY
Sbjct: 1016 PAVFPLTIQLFSTIPVVLHAVGGDDGPLDIGARLYMSSY 1054
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/350 (32%), Positives = 176/350 (50%), Gaps = 50/350 (14%)
Query: 86 SVRASDVTFSSLPTLSISDQVSEFNNRHDQSQFS-PALSGRV-SRSCPGPIIYEDINEAR 143
++RAS+V F+S+P + S + R S P +S ++ S+SCP P E
Sbjct: 76 AMRASNVAFNSMPPMRAE---SGYPRRSASPLLSSPEVSKQLLSKSCPDPRACEQSPGMN 132
Query: 144 SKEFVPPHKSVIPSGKQKNYYVPHWLSEAVTEG------------------TEAYCTVNG 185
+ F I Q+ + HW +AVTE EAYC ++G
Sbjct: 133 GELF-----QQIEGSSQRKIFSSHWSLDAVTEALEKGEAFKALFRVNAHNRNEAYCKIDG 187
Query: 186 VPIDVLVNGVQAQNRAVEGDIVVIQLDPLSYWPRLRG--------SAGLNNSSELGFHK- 236
VP D+L+NG Q+RAVEGD VVI+LDPLS WP+++G G N+ E K
Sbjct: 188 VPTDILINGNVCQSRAVEGDTVVIKLDPLSLWPKMKGFVTESAAKPEGTNSPPEKDDKKA 247
Query: 237 EDNNFIDV---------HSQLGIVHGNYKHGSEGNITSTVNILNGGRASEHGEVSNAIAK 287
N IDV ++ ++ K+G + +++ G + G S A+ K
Sbjct: 248 RQKNGIDVVEGFEDGFSKNKSSVIGKGAKNGVTPSSPPSLDSCLGSFCEQKGNCS-AVDK 306
Query: 288 LCSLVNSYPCKQPTGRVVAIIEKSPRRDFVVGFLRASLWLRSRDRSNKQAKKKCSSLSSA 347
LC +++S+P K+PTG+VVA++EKS RD +VG L W+ ++ K+ K S LS +
Sbjct: 307 LCGILSSFPHKRPTGQVVAVVEKSLVRDSIVGLLDVKGWIHYKESDPKRCK---SPLSLS 363
Query: 348 DREHIQLIPNYAKFPKMLVAVRSLSDCIKMRLDKGDATVDLDLVATDLDD 397
D E++QL+P +FPK++V L I+ RL+ D ++ +LVA + D
Sbjct: 364 DDEYVQLMPADPRFPKLIVPFHVLPGSIRARLENLDPNLEAELVAAQIVD 413
>AT2G17510.1 | ribonuclease II family protein | Chr2:7609395-7615881
REVERSE LENGTH=933 | 201606
Length = 933
Score = 167 bits (423), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 165/295 (55%), Gaps = 24/295 (8%)
Query: 394 DLDDALSVELISDDILGVGVHISDVFYFVLPGTPLDVEALTRSTSVYLRQSKLPMLPPLV 453
D+DDAL + + +GVHI+DV FV PGTPLD EA R TSVYL + ++ MLP +
Sbjct: 487 DIDDALHCTSLPNGNFELGVHIADVTNFVHPGTPLDDEASKRGTSVYLVERRIDMLPKPL 546
Query: 454 SENMGSLIPGVDRLAFSIIWDINKLGDIVDRWLGRTVIHSCCKLSYQQAKDIIDGS--TD 511
+E++ SL V+RLAFS+IW+++ +I+ +++I S LSY +A+ +D S TD
Sbjct: 547 TEDICSLRADVERLAFSVIWEMSPDAEIISTRFTKSIIKSSAALSYIEAQARMDDSRLTD 606
Query: 512 SGTSGSFCPKIYGQFELQHINRFVKYLHEISKRLRDKRFKDGALRLESSKLVFMFD-EFG 570
S T+ +L+++N ++K +R +R GAL L S+++ F D E
Sbjct: 607 SLTT-----------DLRNMN-------TLAKIMRQRRIDRGALTLASAEVKFDIDPENH 648
Query: 571 IPKDNSFYEQTDSHSLVEELMLLANNTVAEVISRAFPDCALLRRHLEPNLRKLKEFEAFC 630
P + Y+ +++ +VEE ML AN +VA I + FP C+LLRRH P L+
Sbjct: 649 DPLNIGMYQILEANQMVEEFMLAANVSVAGQILKLFPSCSLLRRHPTPTREMLEPLLRTA 708
Query: 631 QKHGLDLDTSSSRNIQLSLERIKEKLKNDPVFFDILLSYASKPMQLAAYFSTGDF 685
GL LD SSS+ + SL+R + DP F ++ A++ M A YF +GD
Sbjct: 709 AAIGLTLDVSSSKALADSLDR---AVGEDPYFNKLIRILATRCMTQAVYFCSGDL 760
>AT2G17510.2 | ribonuclease II family protein | Chr2:7609395-7616242
REVERSE LENGTH=1012 | 201606
Length = 1012
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 165/307 (53%), Gaps = 36/307 (11%)
Query: 394 DLDDALSVELISDDILGVGV------------HISDVFYFVLPGTPLDVEALTRSTSVYL 441
D+DDAL + + +GV +I+DV FV PGTPLD EA R TSVYL
Sbjct: 554 DIDDALHCTSLPNGNFELGVRILESSDSHKYDYIADVTNFVHPGTPLDDEASKRGTSVYL 613
Query: 442 RQSKLPMLPPLVSENMGSLIPGVDRLAFSIIWDINKLGDIVDRWLGRTVIHSCCKLSYQQ 501
+ ++ MLP ++E++ SL V+RLAFS+IW+++ +I+ +++I S LSY +
Sbjct: 614 VERRIDMLPKPLTEDICSLRADVERLAFSVIWEMSPDAEIISTRFTKSIIKSSAALSYIE 673
Query: 502 AKDIIDGS--TDSGTSGSFCPKIYGQFELQHINRFVKYLHEISKRLRDKRFKDGALRLES 559
A+ +D S TDS T+ +L+++N ++K +R +R GAL L S
Sbjct: 674 AQARMDDSRLTDSLTT-----------DLRNMN-------TLAKIMRQRRIDRGALTLAS 715
Query: 560 SKLVFMFD-EFGIPKDNSFYEQTDSHSLVEELMLLANNTVAEVISRAFPDCALLRRHLEP 618
+++ F D E P + Y+ +++ +VEE ML AN +VA I + FP C+LLRRH P
Sbjct: 716 AEVKFDIDPENHDPLNIGMYQILEANQMVEEFMLAANVSVAGQILKLFPSCSLLRRHPTP 775
Query: 619 NLRKLKEFEAFCQKHGLDLDTSSSRNIQLSLERIKEKLKNDPVFFDILLSYASKPMQLAA 678
L+ GL LD SSS+ + SL+R + DP F ++ A++ M A
Sbjct: 776 TREMLEPLLRTAAAIGLTLDVSSSKALADSLDR---AVGEDPYFNKLIRILATRCMTQAV 832
Query: 679 YFSTGDF 685
YF +GD
Sbjct: 833 YFCSGDL 839
>AT5G02250.1 | Ribonuclease II/R family protein | Chr5:454902-459063
FORWARD LENGTH=803 | 201606
Length = 803
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 385 TVDLDLVATDLDDALSVELISDDILGVGVHISDVFYFVLPGTPLDVEALTRSTSVYLRQS 444
+D+D A +LDDALS + D + + +H++D +V PG+ +D EA R TSV+L +
Sbjct: 409 AIDVD-EADELDDALSATRLQDGRIKIWIHVADPARYVTPGSKVDREARRRGTSVFLPTA 467
Query: 445 KLPMLPPLVSENMGSLIPGVDRLAFSIIWDINKLGDIVDRWLGRTVIHSCCKLSYQQA 502
PM P ++ SL G + A S+ + G I + + ++I L+Y+ A
Sbjct: 468 TYPMFPEKLAMEGMSLRQGENCNAVSVSVVLRSDGCITEYSVDNSIIRPTYMLTYESA 525