BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0040.1
(144 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G47680.1 | DNA binding protein | Chr3:17577483-17578391 REVER... 64 8e-13
AT5G41220.2 | glutathione S-transferase THETA 3 | Chr5:16494560-... 55 3e-09
AT5G41220.1 | glutathione S-transferase THETA 3 | Chr5:16494560-... 55 3e-09
AT5G41220.3 | glutathione S-transferase THETA 3 | Chr5:16494560-... 54 4e-09
AT1G66235.1 | no-apical-meristem-associated carboxy-terminal dom... 53 9e-09
>AT3G47680.1 | DNA binding protein | Chr3:17577483-17578391 REVERSE
LENGTH=302 | 201606
Length = 302
Score = 64.3 bits (155), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 50 KRYTQVDDSVLVNAYLHIVTDAIIGNDQRADTFWNKITEHFNERTNQN----RVANGLKC 105
++++ +D VLV+A+L+ DA+IGN+Q+ FW++I ++ N R +K
Sbjct: 48 RKWSAGEDLVLVSAWLNTSKDAVIGNEQKGYAFWSRIAAYYGASPKLNGVEKRETGHIKQ 107
Query: 106 RWSEINKQCAKFCVYLSLLQRNPKSGENDDDRV 138
RW++IN+ KF + SG+NDDD V
Sbjct: 108 RWTKINEGVGKFVGSYEAATKQKSSGQNDDDVV 140
>AT5G41220.2 | glutathione S-transferase THETA 3 |
Chr5:16494560-16496623 REVERSE LENGTH=540 | 201606
Length = 540
Score = 54.7 bits (130), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 50 KRYTQVDDSVLVNAYLHIVTDAIIGNDQRADTFWNKITEHFNERTN----QNRVANGLKC 105
+++++ +D++L++A+L+ D I+ N+ +A FW +I +FN + R + K
Sbjct: 221 RKWSRAEDAILISAWLNTSKDPIVDNEHKACAFWKRIGAYFNNSASLANLPKREPSHCKQ 280
Query: 106 RWSEINKQCAKF--CVYLSLLQRNPKSGENDDD 136
RWS++N + KF C +L QR+ SG+++DD
Sbjct: 281 RWSKLNDKVCKFVGCYDQALNQRS--SGQSEDD 311
>AT5G41220.1 | glutathione S-transferase THETA 3 |
Chr5:16494560-16496969 REVERSE LENGTH=590 | 201606
Length = 590
Score = 54.7 bits (130), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 50 KRYTQVDDSVLVNAYLHIVTDAIIGNDQRADTFWNKITEHFNERTN----QNRVANGLKC 105
+++++ +D++L++A+L+ D I+ N+ +A FW +I +FN + R + K
Sbjct: 271 RKWSRAEDAILISAWLNTSKDPIVDNEHKACAFWKRIGAYFNNSASLANLPKREPSHCKQ 330
Query: 106 RWSEINKQCAKF--CVYLSLLQRNPKSGENDDD 136
RWS++N + KF C +L QR+ SG+++DD
Sbjct: 331 RWSKLNDKVCKFVGCYDQALNQRS--SGQSEDD 361
>AT5G41220.3 | glutathione S-transferase THETA 3 |
Chr5:16494560-16496525 REVERSE LENGTH=532 | 201606
Length = 532
Score = 54.3 bits (129), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 50 KRYTQVDDSVLVNAYLHIVTDAIIGNDQRADTFWNKITEHFNERTN----QNRVANGLKC 105
+++++ +D++L++A+L+ D I+ N+ +A FW +I +FN + R + K
Sbjct: 213 RKWSRAEDAILISAWLNTSKDPIVDNEHKACAFWKRIGAYFNNSASLANLPKREPSHCKQ 272
Query: 106 RWSEINKQCAKF--CVYLSLLQRNPKSGENDDD 136
RWS++N + KF C +L QR+ SG+++DD
Sbjct: 273 RWSKLNDKVCKFVGCYDQALNQRS--SGQSEDD 303
>AT1G66235.1 | no-apical-meristem-associated carboxy-terminal domain
protein | Chr1:24683006-24683931 REVERSE LENGTH=284 |
201606
Length = 284
Score = 53.1 bits (126), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 52 YTQVDDSVLVNAYLHIVTDAIIGNDQRADTFWNKITEHFNERTN---QNRVANGLKCRWS 108
Y+ +D L Y+ I D IIG Q +D FW+++ E F R N R L+CR
Sbjct: 7 YSNEEDKFLCQVYMDISQDPIIGVYQSSDHFWDRVAESFENRKNPTWSKRSKKSLQCRLQ 66
Query: 109 EINKQCAKFCVYLSLLQRNPKSGENDDD 136
I K K + L + SG + DD
Sbjct: 67 TIEKASKKLHACIKLCENRRSSGASSDD 94