BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0080.1
(333 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G35830.1 | VQ motif-containing protein | Chr1:13321214-133221... 88 2e-19
AT5G65170.1 | VQ motif-containing protein | Chr5:26041218-260423... 89 2e-19
AT4G39720.4 | VQ motif-containing protein | Chr4:18429992-184308... 74 8e-15
AT4G39720.1 | VQ motif-containing protein | Chr4:18429992-184308... 74 8e-15
AT4G39720.3 | VQ motif-containing protein | Chr4:18429304-184308... 74 9e-15
>AT1G35830.1 | VQ motif-containing protein | Chr1:13321214-13322122
REVERSE LENGTH=302 | 201606
Length = 302
Score = 87.8 bits (216), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/56 (78%), Positives = 48/56 (85%), Gaps = 3/56 (5%)
Query: 169 NPKKRSRASRRAPTTVLTTDTSNFRAMVQEFTGIPALPFSAPSSSTLFPRRRLDLF 224
NP+KR+RASRRAPTTVLTTDTSNFRAMVQEFTG+PA PFS P SST RR D+F
Sbjct: 98 NPRKRTRASRRAPTTVLTTDTSNFRAMVQEFTGVPASPFSHPFSSTT---RRFDIF 150
>AT5G65170.1 | VQ motif-containing protein | Chr5:26041218-26042306
FORWARD LENGTH=362 | 201606
Length = 362
Score = 88.6 bits (218), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/56 (80%), Positives = 47/56 (83%), Gaps = 2/56 (3%)
Query: 169 NPKKRSRASRRAPTTVLTTDTSNFRAMVQEFTGIPALPFSAPSSSTLFPRRRLDLF 224
NPKKRSR SRRAPTTVLTTDTSNFRAMVQEFTG P+ PF+ SSS FPR R DLF
Sbjct: 138 NPKKRSRVSRRAPTTVLTTDTSNFRAMVQEFTGNPSTPFTGLSSS--FPRSRFDLF 191
>AT4G39720.4 | VQ motif-containing protein | Chr4:18429992-18430864
REVERSE LENGTH=290 | 201606
Length = 290
Score = 74.3 bits (181), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 35/37 (94%), Positives = 35/37 (94%)
Query: 171 KKRSRASRRAPTTVLTTDTSNFRAMVQEFTGIPALPF 207
KKRSRASRRAPTTVLTTDTSNFRAMVQEFTGIPA P
Sbjct: 115 KKRSRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPL 151
>AT4G39720.1 | VQ motif-containing protein | Chr4:18429992-18430864
REVERSE LENGTH=290 | 201606
Length = 290
Score = 74.3 bits (181), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 35/37 (94%), Positives = 35/37 (94%)
Query: 171 KKRSRASRRAPTTVLTTDTSNFRAMVQEFTGIPALPF 207
KKRSRASRRAPTTVLTTDTSNFRAMVQEFTGIPA P
Sbjct: 115 KKRSRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPL 151
>AT4G39720.3 | VQ motif-containing protein | Chr4:18429304-18430864
REVERSE LENGTH=294 | 201606
Length = 294
Score = 74.3 bits (181), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 35/37 (94%), Positives = 35/37 (94%)
Query: 171 KKRSRASRRAPTTVLTTDTSNFRAMVQEFTGIPALPF 207
KKRSRASRRAPTTVLTTDTSNFRAMVQEFTGIPA P
Sbjct: 115 KKRSRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPL 151