BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000117.1_g0100.1
         (224 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G42723.1 | ATP binding / aminoacyl-tRNA ligase/ nucleotide bi...    49   2e-06
AT1G67020.1 | transmembrane protein | Chr1:25011008-25012987 REV...    48   3e-06

>AT3G42723.1 | ATP binding / aminoacyl-tRNA ligase/ nucleotide
           binding protein | Chr3:14838392-14841189 REVERSE
           LENGTH=818 | 201606
          Length = 818

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 2/121 (1%)

Query: 100 EQFFQFQPAPESDWVSLASFHLEGDAQYWYQLFKKEGHNIPWEEFKEGLLARFGPSQFH- 158
           E +F     PE + + +   +LEGD   W +   K+     W+EFK  ++AR   +    
Sbjct: 279 ENYFGENNIPEQERLQIVYSNLEGDIGQWIKHLWKKNSPTSWKEFK-CMMARETKTTMKV 337

Query: 159 DYFGELIKLNQKGTVKDYQTEFEKLLAKVGHLPQDRQVSCFVSGLRDSIRTDVQAARPTT 218
           ++      + Q+G+V++Y+  FE L      LP     + F+ GL+ S++T V+  +P  
Sbjct: 338 NHQPHYSGIQQEGSVREYRERFEALCLGSVILPGQGLEALFLQGLQPSLQTAVRELKPNG 397

Query: 219 L 219
           +
Sbjct: 398 I 398


>AT1G67020.1 | transmembrane protein | Chr1:25011008-25012987
           REVERSE LENGTH=659 | 201606
          Length = 659

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 8/131 (6%)

Query: 32  ERMDQKISTAKEVAENCLSTARNTREVNNGNRGSSSSNFTNSYAPRLVK-LDFPRFKEGD 90
           ERM+ +     E  E+   + R++   +   RG+  S         L++ ++ P F +G 
Sbjct: 60  ERMEIREGKRVEQGEHSCQSPRHSFSSSMPQRGAGESPILLDNRSSLIRRIEMPVF-DGS 118

Query: 91  EPISWICRAEQFFQFQPAPESDWVSLASFHLEGDAQYWYQLFKKEGHNIP---WEEFKEG 147
               W  + E+FF+     +SD + L +  LEG A  W   F +E   +    W  F++ 
Sbjct: 119 GVYEWFSKVERFFRVGRYQDSDKLDLVALSLEGVALKW---FLREMSTLEFRDWNSFEQR 175

Query: 148 LLARFGPSQFH 158
           LLARF P + H
Sbjct: 176 LLARFDPVKIH 186


Top