BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0100.1
(224 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G42723.1 | ATP binding / aminoacyl-tRNA ligase/ nucleotide bi... 49 2e-06
AT1G67020.1 | transmembrane protein | Chr1:25011008-25012987 REV... 48 3e-06
>AT3G42723.1 | ATP binding / aminoacyl-tRNA ligase/ nucleotide
binding protein | Chr3:14838392-14841189 REVERSE
LENGTH=818 | 201606
Length = 818
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
Query: 100 EQFFQFQPAPESDWVSLASFHLEGDAQYWYQLFKKEGHNIPWEEFKEGLLARFGPSQFH- 158
E +F PE + + + +LEGD W + K+ W+EFK ++AR +
Sbjct: 279 ENYFGENNIPEQERLQIVYSNLEGDIGQWIKHLWKKNSPTSWKEFK-CMMARETKTTMKV 337
Query: 159 DYFGELIKLNQKGTVKDYQTEFEKLLAKVGHLPQDRQVSCFVSGLRDSIRTDVQAARPTT 218
++ + Q+G+V++Y+ FE L LP + F+ GL+ S++T V+ +P
Sbjct: 338 NHQPHYSGIQQEGSVREYRERFEALCLGSVILPGQGLEALFLQGLQPSLQTAVRELKPNG 397
Query: 219 L 219
+
Sbjct: 398 I 398
>AT1G67020.1 | transmembrane protein | Chr1:25011008-25012987
REVERSE LENGTH=659 | 201606
Length = 659
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 8/131 (6%)
Query: 32 ERMDQKISTAKEVAENCLSTARNTREVNNGNRGSSSSNFTNSYAPRLVK-LDFPRFKEGD 90
ERM+ + E E+ + R++ + RG+ S L++ ++ P F +G
Sbjct: 60 ERMEIREGKRVEQGEHSCQSPRHSFSSSMPQRGAGESPILLDNRSSLIRRIEMPVF-DGS 118
Query: 91 EPISWICRAEQFFQFQPAPESDWVSLASFHLEGDAQYWYQLFKKEGHNIP---WEEFKEG 147
W + E+FF+ +SD + L + LEG A W F +E + W F++
Sbjct: 119 GVYEWFSKVERFFRVGRYQDSDKLDLVALSLEGVALKW---FLREMSTLEFRDWNSFEQR 175
Query: 148 LLARFGPSQFH 158
LLARF P + H
Sbjct: 176 LLARFDPVKIH 186