BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0110.1
(318 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G29750.1 | Eukaryotic aspartyl protease family protein | Chr3... 58 3e-09
AT3G30770.1 | Eukaryotic aspartyl protease family protein | Chr3... 52 5e-07
>AT3G29750.1 | Eukaryotic aspartyl protease family protein |
Chr3:11579125-11580600 REVERSE LENGTH=421 | 201606
Length = 421
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 77 VSAPKTMRVMAMIKGKPVLILIDSGSTDNFVSEKVGRKVGLKPSGRKFQVDVASGER--L 134
++ K MR I V++ IDSG+TDNF+ ++ + L P+ Q V G+R +
Sbjct: 118 LTRNKGMRFYGFILDHKVVVAIDSGATDNFILVELAFSLKL-PTSITNQASVLLGQRQCI 176
Query: 135 ESAGKCRNIQIKLQGTSLIVDLYLLPLG--SYDVVLGVQWLCTLGPIIWDFSKLQMKF 190
+S G C I++ +Q + + LL L DV+LG +WL LG + ++ F
Sbjct: 177 QSVGTCLGIRLWVQEVEITENFLLLDLAKTDVDVILGYEWLSKLGETMVNWQNQDFSF 234
>AT3G30770.1 | Eukaryotic aspartyl protease family protein |
Chr3:12445493-12448085 FORWARD LENGTH=603 | 201606
Length = 603
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 66 IPEISLHAMTGVSAPKTMRVMAMIKGKPVLILIDSGSTDNFVSEKVGRKVGLKPSGRKFQ 125
I ++ + T + K MR I V+++IDSG+T+NF+S+++ + L P+ Q
Sbjct: 267 IRQVKRQSTTEFTKGKDMRFYGFISCHKVVVVIDSGATNNFISDELALVLKL-PTSTTNQ 325
Query: 126 VDVASGER--LESAGKCRNIQIKLQGTSLIVDLYLLPL--GSYDVVLGV--------QWL 173
V G+R +++ G C I + +Q + + LL L DV+LG QWL
Sbjct: 326 ASVLLGQRQCIQTIGTCFGINLLVQEVEINENFLLLDLTKTDVDVILGYGGSQNLERQWL 385
Query: 174 CTLGPIIWDFS 184
L DFS
Sbjct: 386 IWLNQ---DFS 393