BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0150.1
(366 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G64950.1 | Mitochondrial transcription termination factor fam... 167 3e-48
AT5G07900.1 | Mitochondrial transcription termination factor fam... 163 2e-46
AT1G21150.3 | Mitochondrial transcription termination factor fam... 143 3e-39
AT1G21150.1 | Mitochondrial transcription termination factor fam... 142 8e-39
AT1G21150.2 | Mitochondrial transcription termination factor fam... 142 3e-38
>AT5G64950.1 | Mitochondrial transcription termination factor family
protein | Chr5:25953887-25955062 FORWARD LENGTH=391 |
201606
Length = 391
Score = 167 bits (424), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 195/369 (52%), Gaps = 13/369 (3%)
Query: 3 IKLFRNLISNSN------PQKFQLLFFSSSSKPKKSKSIPISEYLINRHGFSPETTSKIS 56
++ +L+SNS + L FSS++ P + E+L + +GF I+
Sbjct: 1 MQFLASLVSNSRKFGRRWDRALSLHHFSSNATPASISNPAFVEFLRD-NGFQKPLAIAIA 59
Query: 57 ARINTVRNPEKSDSVLDFLHNNGFSNTHVEKLLAILPRILNSNLEKTIKPKLNVFMDLGF 116
R +++ E+ SV+ L + FS+T ++K + + PR++ N+EK ++PKL F D+GF
Sbjct: 60 MRYPNLKSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGF 119
Query: 117 TKEGIADIISSNPWLLKRSANNRLVPSIVSLKEIVGSTSGISKVL--KGSTFFLHHDLEK 174
T G+ +S N ++ S +L+P++ LK IV V+ + L D
Sbjct: 120 TGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNL 179
Query: 175 TCIPNIELLKSCGICISQIIKVLYNYPRFLLIKPETMKELIQRADELGGDRESKMYIHGI 234
+PNI L++CGI SQ+ +L PR + E ++ + RA +LG S+M +H +
Sbjct: 180 FLLPNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAV 239
Query: 235 RALGSMTKESWELKLELFKSLGWSEDDILFMFKRMPSVFTASNRKLKEGVDFLFKAAKCN 294
+L S+++++++ K++LF + G+SED+I + +R P + S KL G +F K
Sbjct: 240 ISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLE 299
Query: 295 ASFLVLHPEMLMYSLERRVKPRVEVLETLKSKNLIAETGC----WASICKMTDDRFAKKY 350
L P +L Y+LE+RV PR++VL+ L+ K L+ + I +MT++ F +KY
Sbjct: 300 REALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKY 359
Query: 351 ILPHENEVG 359
++ +E+
Sbjct: 360 VVRFGDEIA 368
>AT5G07900.1 | Mitochondrial transcription termination factor family
protein | Chr5:2520188-2521405 FORWARD LENGTH=405 |
201606
Length = 405
Score = 163 bits (413), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 170/320 (53%), Gaps = 2/320 (0%)
Query: 40 YLINRHGFSPETTSKISARINTVRNPEKSDSVLDFLHNNGFSNTHVEKLLAILPRILNSN 99
YLI+ G SP++ + +++R + +PE+ ++VL+ L ++GF+ + L+ P +L +N
Sbjct: 74 YLIDSCGLSPDSAT-VASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLAN 132
Query: 100 LEKTIKPKLNVFMDLGFTKEGIADIISSNPWLLKRSANNRLVPSIVSLKEIVGSTSGISK 159
E + PKL+ F+ +G +K +A ++S+P +L RS N+L+PS LK ++ S I
Sbjct: 133 AESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKIVA 192
Query: 160 VLKGSTFFLHHDLEKTCIPNIELLKSCGICISQIIKVLYNYPRFLLIKPETMKELIQRAD 219
L+ +T+ D K +PNI + G+ I +L ++P ++ K + + ++A
Sbjct: 193 ALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQ 252
Query: 220 ELGGDRESKMYIHGIRAL-GSMTKESWELKLELFKSLGWSEDDILFMFKRMPSVFTASNR 278
E+G + + ++ I AL G K W+ E+++ GWSEDDI+ FK+ P S R
Sbjct: 253 EMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSER 312
Query: 279 KLKEGVDFLFKAAKCNASFLVLHPEMLMYSLERRVKPRVEVLETLKSKNLIAETGCWASI 338
K+ +++ + P +L +SLE+R+ PR V + L S L+ E S+
Sbjct: 313 KINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSL 372
Query: 339 CKMTDDRFAKKYILPHENEV 358
+ F +K ++ +E E+
Sbjct: 373 LVPVEKVFLEKLVIKYEEEL 392
>AT1G21150.3 | Mitochondrial transcription termination factor family
protein | Chr1:7406406-7407770 REVERSE LENGTH=354 |
201606
Length = 354
Score = 143 bits (360), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 160/320 (50%), Gaps = 2/320 (0%)
Query: 40 YLINRHGFSPETTSKISARINTVRNPEKSDSVLDFLHNNGFSNTHVEKLLAILPRILNSN 99
YL++ G S E+ +K ++R + + +K DSVL ++GF+N + ++ PR+L+ +
Sbjct: 25 YLVDSCGLSLES-AKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLS 83
Query: 100 LEKTIKPKLNVFMDLGFTKEGIADIISSNPWLLKRSANNRLVPSIVSLKEIVGSTSGISK 159
E I PKL F +GF+ A +ISS+P +L S + RL+P SLK I+ + K
Sbjct: 84 PEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVK 143
Query: 160 VLKGSTFFLHHDLEKTCIPNIELLKSCGICISQIIKVLYNYPRFLLIKPETMKELIQRAD 219
LK + + + + G+ I ++ P + E++ R
Sbjct: 144 CLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVC 203
Query: 220 ELGGDRESKMYIHGIRALGSMTKESWELKLELFKSLGWSEDDILFMFKRMPSVFTASNRK 279
G D + ++H + A ++ + E K +LF+ GWS++D + R P+ T S+ K
Sbjct: 204 SYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEK 263
Query: 280 LKEGVDFLFKAAKCNASFLVLHPEMLMYSLERRVKPRVEVLETLKSKNLI-AETGCWASI 338
+ +++L A +V P +L S+E+R+KPR +V+ L SK L+ E + +I
Sbjct: 264 IMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTI 323
Query: 339 CKMTDDRFAKKYILPHENEV 358
K+ F K++L +++E+
Sbjct: 324 LKLKSSEFMDKFVLKYQDEM 343
>AT1G21150.1 | Mitochondrial transcription termination factor family
protein | Chr1:7406406-7407578 REVERSE LENGTH=390 |
201606
Length = 390
Score = 142 bits (359), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 160/320 (50%), Gaps = 2/320 (0%)
Query: 40 YLINRHGFSPETTSKISARINTVRNPEKSDSVLDFLHNNGFSNTHVEKLLAILPRILNSN 99
YL++ G S E+ +K ++R + + +K DSVL ++GF+N + ++ PR+L+ +
Sbjct: 61 YLVDSCGLSLES-AKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLS 119
Query: 100 LEKTIKPKLNVFMDLGFTKEGIADIISSNPWLLKRSANNRLVPSIVSLKEIVGSTSGISK 159
E I PKL F +GF+ A +ISS+P +L S + RL+P SLK I+ + K
Sbjct: 120 PEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVK 179
Query: 160 VLKGSTFFLHHDLEKTCIPNIELLKSCGICISQIIKVLYNYPRFLLIKPETMKELIQRAD 219
LK + + + + G+ I ++ P + E++ R
Sbjct: 180 CLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVC 239
Query: 220 ELGGDRESKMYIHGIRALGSMTKESWELKLELFKSLGWSEDDILFMFKRMPSVFTASNRK 279
G D + ++H + A ++ + E K +LF+ GWS++D + R P+ T S+ K
Sbjct: 240 SYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEK 299
Query: 280 LKEGVDFLFKAAKCNASFLVLHPEMLMYSLERRVKPRVEVLETLKSKNLI-AETGCWASI 338
+ +++L A +V P +L S+E+R+KPR +V+ L SK L+ E + +I
Sbjct: 300 IMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTI 359
Query: 339 CKMTDDRFAKKYILPHENEV 358
K+ F K++L +++E+
Sbjct: 360 LKLKSSEFMDKFVLKYQDEM 379
>AT1G21150.2 | Mitochondrial transcription termination factor family
protein | Chr1:7406406-7407770 REVERSE LENGTH=454 |
201606
Length = 454
Score = 142 bits (359), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 160/320 (50%), Gaps = 2/320 (0%)
Query: 40 YLINRHGFSPETTSKISARINTVRNPEKSDSVLDFLHNNGFSNTHVEKLLAILPRILNSN 99
YL++ G S E+ +K ++R + + +K DSVL ++GF+N + ++ PR+L+ +
Sbjct: 125 YLVDSCGLSLES-AKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLS 183
Query: 100 LEKTIKPKLNVFMDLGFTKEGIADIISSNPWLLKRSANNRLVPSIVSLKEIVGSTSGISK 159
E I PKL F +GF+ A +ISS+P +L S + RL+P SLK I+ + K
Sbjct: 184 PEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVK 243
Query: 160 VLKGSTFFLHHDLEKTCIPNIELLKSCGICISQIIKVLYNYPRFLLIKPETMKELIQRAD 219
LK + + + + G+ I ++ P + E++ R
Sbjct: 244 CLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVC 303
Query: 220 ELGGDRESKMYIHGIRALGSMTKESWELKLELFKSLGWSEDDILFMFKRMPSVFTASNRK 279
G D + ++H + A ++ + E K +LF+ GWS++D + R P+ T S+ K
Sbjct: 304 SYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEK 363
Query: 280 LKEGVDFLFKAAKCNASFLVLHPEMLMYSLERRVKPRVEVLETLKSKNLI-AETGCWASI 338
+ +++L A +V P +L S+E+R+KPR +V+ L SK L+ E + +I
Sbjct: 364 IMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTI 423
Query: 339 CKMTDDRFAKKYILPHENEV 358
K+ F K++L +++E+
Sbjct: 424 LKLKSSEFMDKFVLKYQDEM 443